Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11p16
(638 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.8
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 5.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 5.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 7.6
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 433 SDYYARTSSNNM*SAKTCIQNINSVEQTP 519
S+Y ++NN + K NIN +EQ P
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIP 120
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 543 FEGLSLMVRSLFHRVNILDACLS 475
F ++L ++LF+ VN++ C+S
Sbjct: 226 FFNITLRRKTLFYTVNLIVPCVS 248
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = -1
Query: 95 SENSLFTKYKESYLFKCWNTHDRWH 21
S S K SY F W D W+
Sbjct: 339 SSCSYMAHEKLSYAFSVWRMEDDWN 363
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 273 FSKLFPSFSIPWASLVT*SVTDKFSPTSGFI 181
F L +++IPWA + V +F P GF+
Sbjct: 165 FIVLIWTYTIPWALMPVMGVWGRFVP-EGFL 194
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 454 SSNNM*SAKTCIQNINSVEQTP 519
++NN + K NIN +EQ P
Sbjct: 97 NNNNYNNYKKLYYNINYIEQVP 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,954
Number of Sequences: 438
Number of extensions: 3865
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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