Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11p14
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.2  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    21   6.6  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 438 ALRSVSIPLPVWSMRALWALPIPG 509
           A  SV+ P P   M  L+  P+PG
Sbjct: 306 AFNSVATPTPTSVMTELYPSPVPG 329


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 87  RRVNKINVNNGFSS 128
           R  N++ VNNGF++
Sbjct: 1   RERNRVKVNNGFAN 14


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,726
Number of Sequences: 336
Number of extensions: 1964
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)