Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11p14
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   0.89 
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   6.3  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.3  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   8.3  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
 Frame = +3

Query: 63  IQNFQVTNRRVNKINVNN--GFSSEEGCFDEKCVVLKMHQGASF---DFRGHQEKHRAVI 227
           +  +Q+    ++  N  N  G      C  E  V   +  GA     D+RG+   HRAV+
Sbjct: 767 LHEYQLAEELLDLPNDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVV 826

Query: 228 GGPKRRVRLRDLAPGTR 278
                 VRL  L  G R
Sbjct: 827 ENVPDMVRLLLLQGGLR 843


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 256 ETWRPGRGDQLVSWRNYAEKKDEKKE 333
           E W P  G +L+   NY  K   KK+
Sbjct: 251 EHWIPHCGARLILNSNYTRKSSSKKD 276


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 555 TMRPLPKPVPMP 590
           T +P PKP+P P
Sbjct: 414 TAKPTPKPIPKP 425


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 555 TMRPLPKPVPMP 590
           T +P PKP+P P
Sbjct: 414 TAKPTPKPIPKP 425


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 227 NNGAVLFLVPAEVKARPLMHFKNDTFFVKTAFLR 126
           +NG V+F   A V     M+ KND  + K A +R
Sbjct: 56  DNGTVVFEPCAIVLYLVEMYAKNDALYPKDALVR 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,623
Number of Sequences: 2352
Number of extensions: 8383
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)