Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11p14
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 3.8
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 5.0
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 6.6
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 6.6
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 179 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 90
PLM+FK+ TFF K L T +++Y + FV+S
Sbjct: 327 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 357
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 179 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 90
PLM+FK+ TFF K L T +++Y + FV+S
Sbjct: 361 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 391
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 179 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 90
PLM+FK+ TFF K L T +++Y + FV+S
Sbjct: 359 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 389
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 501 IPGPLWSLWSLWSVRTLRTMRPL 569
+ G L LW LWS+R L T+R L
Sbjct: 2011 LEGVLNELWKLWSLRYLSTLREL 2033
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 499 GKAHKARMDHTGKGIDTDRKARMDHKARMARTEDTVQGTDRTAHRDHMD 353
GKA + ++ ++DR+ D R R ++ DR HR H D
Sbjct: 51 GKAPEYARNYDSDSSESDRETDRDDDRRRRRRRESSDEEDRRRHRRHED 99
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 501 IPGPLWSLWSLWSVRTLRTMRPL 569
+ G L LW LWS+R L T+R L
Sbjct: 2011 LEGVLNELWKLWSLRYLSTLREL 2033
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 538 DHRDHRDHKGPGIGKAHKARMDHTGKGIDTDRKARMDHKARMARTE 401
DHRDHR G + H+ +H + D R R + R R++
Sbjct: 290 DHRDHRHRDHRGEHREHREHKEH--RRDDRHRSERSERSERSERSD 333
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 184 ALTSAGTKKSTAPLLAARSDASVSETWRPGRGDQLV 291
A+ S S + L++A SD++V W PG G+ L+
Sbjct: 468 AIWSVAYHSSNSRLVSASSDSTV-RLWEPGNGEPLI 502
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 184 ALTSAGTKKSTAPLLAARSDASVSETWRPGRGDQLV 291
A+ S S + L++A SD++V W PG G+ L+
Sbjct: 468 AIWSVAYHSSNSRLVSASSDSTV-RLWEPGNGEPLI 502
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 290 TSWSPRPGRQVSETDASLRAANNGAVLFLVP 198
TSWSP R +S + +S+ AN G LF +P
Sbjct: 763 TSWSPTAFRDLSHSISSINMANTG--LFSMP 791
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 561 RPLPKPVPMPMSKPAKE 611
+P+P P PMP SKP E
Sbjct: 85 KPMPFPKPMPKSKPKSE 101
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 561 RPLPKPVPMPMSKPAKE 611
+P+P P PMP SKP E
Sbjct: 149 KPMPFPKPMPKSKPKSE 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,827,525
Number of Sequences: 27780
Number of extensions: 195060
Number of successful extensions: 968
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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