Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11p12
(172 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 2.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 2.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 2.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 2.4
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 20 2.4
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 20 3.2
DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 19 4.2
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 19 4.2
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 19 5.5
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 19 7.3
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 18 9.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 18 9.7
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 64 VCICFITAAL 35
VC+CFI A+L
Sbjct: 369 VCMCFIYASL 378
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 64 VCICFITAAL 35
VC+CFI A+L
Sbjct: 338 VCMCFIYASL 347
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 64 VCICFITAAL 35
VC+CFI A+L
Sbjct: 389 VCMCFIYASL 398
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 2.4
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 64 VCICFITAAL 35
VC+CFI A+L
Sbjct: 338 VCMCFIYASL 347
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 114 QFCNQRYLKQN 146
+FCN+RY +N
Sbjct: 39 EFCNRRYRTKN 49
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 170 FFLIHITFILFQISLV 123
FF++ T+I+ I+LV
Sbjct: 413 FFIVIFTYIIILITLV 428
>DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse
transcriptase protein.
Length = 42
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/18 (38%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
Frame = +3
Query: 114 QFC--NQRYLKQNKCNMY 161
Q+C ++ +K+NKCN +
Sbjct: 20 QYCLHHKILIKKNKCNAF 37
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 19.4 bits (38), Expect = 4.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 160 YILHLFC 140
+ILHLFC
Sbjct: 282 FILHLFC 288
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 71 RLGLHLLYYCSTTTVL 24
R+G L Y + TT+L
Sbjct: 133 RMGYRALLYYTVTTIL 148
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 18.6 bits (36), Expect = 7.3
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +3
Query: 138 KQNKCNMY 161
+QN CN+Y
Sbjct: 371 RQNSCNIY 378
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 80 YHNRLGLHLLYYCSTTTVLPS 18
Y+N LYY +T +++ S
Sbjct: 265 YYNSPSSENLYYVNTESLMKS 285
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 18.2 bits (35), Expect = 9.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 167 FLIHITFILFQISLVTELMSKW 102
FL+ ++ IL SLV L++K+
Sbjct: 278 FLLLVSKILPPTSLVLPLIAKY 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,314
Number of Sequences: 438
Number of extensions: 820
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 36
effective length of database: 130,575
effective search space used: 2611500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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