Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11p11
(724 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.08 |srb8|med12|mediator complex subunit Srb8 |Schizosacc... 33 0.031
SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB comp... 31 0.13
SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple ca... 31 0.22
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.29
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.38
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 29 0.67
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.67
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 29 0.89
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 27 2.1
SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr ... 27 2.7
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 2.7
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 27 2.7
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 27 2.7
SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe... 27 2.7
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 27 3.6
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 3.6
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 26 4.7
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 26 6.3
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 25 8.3
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 25 8.3
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 25 8.3
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 25 8.3
>SPAC688.08 |srb8|med12|mediator complex subunit Srb8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1233
Score = 33.5 bits (73), Expect = 0.031
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 341 VYETVSQELQTDESSSI-SLDSNIKFFKTTVEKLFENFYTSMRDFDLYKQRFNEILAKNK 517
V +T SQ+L +E + ++ N + V L E FY + Y+ +++ + K
Sbjct: 643 VPKTESQKLLLNEMGKLFQVELNFSYDSPDVNLLIEQFY----EITSYESNYDDAFVEYK 698
Query: 518 EESLVDMEDFINDMFQNMMSS 580
+ ++ + +DFI +F N+ S
Sbjct: 699 DATVANRKDFIEFLFHNITVS 719
>SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB complex
subunit Brf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.13
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 242 EHDEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDESSSISLDSNIKFFK 421
+ D V+ +LS T + T L E+ + + V++ L+ DE ISL N+KF +
Sbjct: 330 DFDGNEVKSEELSQTVKVESQETPVHLKADEREIRKEVTETLKGDELRKISLQVNVKFSE 389
Query: 422 TTV 430
V
Sbjct: 390 EEV 392
>SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple
cancers-1 homolog 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 676
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 224 KYYERYEHD-EVPVRESDLSATTDKDVILTNSELDKIEKRVYE-TVSQELQ 370
K+YE++ HD +P+ L+ TDK+ + + + K++Y T + LQ
Sbjct: 567 KWYEKWFHDLNIPLLRKCLTLRTDKNPFIEQPDEPNVTKKIYRVTYTDALQ 617
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.29
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Frame = +2
Query: 278 SATTDKDVILTNSELDKIEKRVYETVSQELQTDESSSISLDSNIKFFKTTVEKLFENFYT 457
S D ++SE + + + S ESSS DS+ + E E+ +
Sbjct: 177 SEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDS 236
Query: 458 SMRDFDLYKQRFNEILAKNKEESLVDMEDFI--NDMFQNMMSSVDIKVTGSTTTAKRSGN 631
S D + +E + S + E +D N S D + S+ + S +
Sbjct: 237 SSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSS 296
Query: 632 CDASTPTNSQGSEGYVTFYNGNLNTDSS 715
D+ + ++S S+ + +GN NTD++
Sbjct: 297 EDSDSTSSSSDSDSSSSSEDGNSNTDTT 324
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 29.9 bits (64), Expect = 0.38
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +2
Query: 248 DEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDESSSIS------LDSNI 409
DE+ + E LS TD V LT SEL I R V ++L+ + I+ LD +
Sbjct: 291 DELHLTEEVLSFLTDDPVTLTASELTDINFRQELDVIRQLEQQKFVEIASQRAKELDVYM 350
Query: 410 KFFK--TTVEKLFENFYTSMRDFDLYKQRFNEILAKNKEESLVDMEDFINDMFQNMMSSV 583
+ FK T F +T +++ + + + L K E + V++ I D F S+
Sbjct: 351 EEFKRSLTENNGFTTLFTELKEKNSISE-LSPSLQKTIEWARVNLASTIYDTFIGKEKSL 409
Query: 584 D 586
+
Sbjct: 410 E 410
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 29.1 bits (62), Expect = 0.67
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +2
Query: 224 KYYERYEHDEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDESSSISLDS 403
KY+E H V SD+S +++ +L K+EK++ ++VS+ QTD+ +
Sbjct: 232 KYFENQLH-LVKASSSDVSNSSNSFPENRYPKLTKVEKQMTKSVSKTSQTDKD-----ED 285
Query: 404 NIKFFKTTVEKL 439
N+ F K + ++
Sbjct: 286 NLDFTKNLLTRI 297
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.1 bits (62), Expect = 0.67
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 314 SELDKIEKRVYETVSQELQTDESSSISLDSNIKFFKTTVEKLFENFYTSMRDFDLYKQRF 493
S ++ I+ ++ E +++Q DES+ LD I K E + + +RD ++
Sbjct: 1495 SLMENIKSQLQEA-KEKIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQL 1553
Query: 494 NEILAKNK 517
N +LA+ K
Sbjct: 1554 NNLLAEEK 1561
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 597 PAQRPQLNVPEIVTHPHPPTRKGRKDTLR-FTMETSIRT 710
P +PQ + +IV+ P+PP+ K K R +M +SI T
Sbjct: 264 PVSQPQPSPDKIVSSPNPPSAKREKKKRRKSSMSSSITT 302
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 305 LTNSELDKIEKRVYETVSQELQTDESSSISLDSN 406
LTN +LD EK + +S T++SSS+ LDS+
Sbjct: 129 LTNEQLDTNEKYLQSALSYTQPTEDSSSL-LDSD 161
>SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 238
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 663 PCELVGVDASQFPERLAVVVEPVTLMSTEDIIFWNMSLIK-SSMSTKDSSLFLAK 502
PC+LVGVD S+ LA + S + + F + +IK S +KD L L K
Sbjct: 93 PCQLVGVDYSEAAIVLAKNIARHRQFS-DKVKFQQLDIIKDSKFCSKDWDLILDK 146
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 305 LTNSELDKIEKRVYETVSQELQTDESSSISLDSNIKFFKTTVEKLFENFY 454
+T + DKI ++ E Q + ++ ++ + F K T E F N Y
Sbjct: 1019 MTLEKFDKISDQILEIAMQSRKENDGRTLKQVIQLTFEKATDEPNFSNMY 1068
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 27.1 bits (57), Expect = 2.7
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Frame = +2
Query: 395 LDSNIKFFKTTVEK-LFENFYTSMRDFDLYKQRFNE------ILAKNKEESLVDMEDFIN 553
L S I F+ +K +F+NFYT + L N +L+K KE + +
Sbjct: 441 LSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQ 500
Query: 554 DMFQNMMSSVDIKVTGSTTTAKRSGNCDAS 643
MFQ++ S +I R+GN D S
Sbjct: 501 RMFQDISLSQEITEAFWQLPQSRAGNIDFS 530
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 407 IKFFKTTVEKLFENFYTSMRDFDLYKQRFNEILAKNKEESLVDME 541
I F + L E MRD ++ QRF EIL E+ L D +
Sbjct: 593 ISGFTDKLHVLLEKVVAMMRDLKVHPQRF-EILKNRLEQELKDYD 636
>SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 368 QTDESSSISLDSNIKFFKTTVEKLFENFYTSMRDFDLYKQRFNE--ILAKNKEES 526
+ DESS +SNI+ + ++ +ENF RD + K R + +L +N+ +S
Sbjct: 122 ERDESSKKLRESNIEKARKAIDDFYENF-NDKRDKVIAKSRKEQEKLLEENESKS 175
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = +2
Query: 224 KYYERYEHDEVPVRESDLSATTDKDVILTNSELDKIEKRVYETVSQELQTDESSSISLDS 403
K+Y +E ++E+DL D + + E R + + L+ D+ ++
Sbjct: 146 KHYREASDNEEDLKETDLYGDRDSFQSRLKQKKQRSEFRASKREMERLERDQELRNKIEE 205
Query: 404 NIKFFKTTVEKLFE 445
K T+EKL E
Sbjct: 206 RNKKELETIEKLRE 219
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 606 RPQLNVPEIVTHPHPPTRKGRKDTLRFTMETSIRT 710
+P+ VP V+HP PPT R++ + E+S+ T
Sbjct: 164 KPRKKVP--VSHPLPPTPPSREEHVSVPRESSLFT 196
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 618 NVPEIVTHPHPPTRKGRKDTLRF--TMETSIRTLRLT 722
++ I++H PTR G + T+ F T S+R L T
Sbjct: 329 DIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAAT 365
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 239 YEHDEVPVRESDLSATTD--KDVILTNSELDKIEKRVYETV 355
YE D+ V ++ T D +D+ E +K+E RVY+ V
Sbjct: 643 YEEDDEDVEAAEKFYTNDIQRDLAKKALECNKLENRVYDLV 683
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 8.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 332 EKRVYETVSQELQTDES-SSISLDSNIKFFKTTVEKLFENFYT 457
EKR YE+ + E + +ES +SI L F + L E+ +T
Sbjct: 369 EKRQYESDASESEAEESKTSIKLRGASSSFHRYAKNLVESVFT 411
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 239 IVRNTLEMNTRGTVRNFSKRSHLN 168
++R++ +NTR T RNFS S N
Sbjct: 726 LIRSSYALNTRKTRRNFSHSSASN 749
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 271 GFPNGHFIVLISFVIL 224
GF NG F+VLISF I+
Sbjct: 420 GFTNGIFLVLISFSIV 435
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 380 SSSISLDSNIKFFKTTVEKLFENFYTSMRDFDLYKQRF 493
+ SIS + +F T E F+ D D+Y Q+F
Sbjct: 483 TGSISCKESSEFSNQTTENSEMEFFDDRPDLDMYIQKF 520
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,806,587
Number of Sequences: 5004
Number of extensions: 54653
Number of successful extensions: 195
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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