Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11p05
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   6.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.1  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -3

Query: 344 SLFRRQVLLCEETLLKSRMTTGMFGIQSNCRIQIFK*TQCAKV 216
           S+ R         L+ S   T    I+ NC+  + K   C K+
Sbjct: 3   SMLRCTFFFLSVILITSYFVTPTMSIKCNCKRHVIKPHICRKI 45


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 353 RDASLFRRQVLLCEET 306
           RD SLF    L C+ET
Sbjct: 95  RDCSLFPGNALSCKET 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,534
Number of Sequences: 438
Number of extensions: 3686
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)