Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11p03
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   5.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   5.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   9.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              20   9.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   9.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   9.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   9.4  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 336 YSFFNKLLRIFGRF 295
           Y  FNKL++ FG++
Sbjct: 113 YIRFNKLVKCFGKY 126


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 336 YSFFNKLLRIFGRF 295
           Y  FNKL++ FG++
Sbjct: 113 YIRFNKLVKCFGKY 126


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 348 NPIYYSFFNKLLR 310
           NPI YS FN   R
Sbjct: 321 NPIIYSIFNTEFR 333


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 361 CYIFCLLIKLSINKKK 408
           CY  C+L K ++  KK
Sbjct: 70  CYFNCVLEKFNVMDKK 85


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 311 ESLEDSLASMVLALVDLSDLIDF 243
           +++EDS+      L D++ L DF
Sbjct: 168 KAMEDSVGGKCEVLYDIAPLSDF 190


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 399  INTKLY*KTKYITHKYINPIYYSFF 325
            +N K+Y +  YI  +  +  +YS F
Sbjct: 938  VNKKVYKQNDYIVDESSSSSFYSSF 962


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 135 LHSHKHFATKIS*KWHFLPSF 73
           LH+H+ F    S    F P+F
Sbjct: 359 LHNHQSFGMDFSLNEDFYPTF 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,505
Number of Sequences: 438
Number of extensions: 1568
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)