Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11o19
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46381-3|CAA86516.1| 354|Caenorhabditis elegans Hypothetical pr... 216 2e-56
U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily ass... 31 0.64
U58757-4|AAC47922.3| 580|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical pr... 30 1.5
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 29 2.6
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 3.4
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 29 4.5
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 5.9
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 28 7.8
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 28 7.8
U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 28 7.8
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 28 7.8
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 28 7.8
>Z46381-3|CAA86516.1| 354|Caenorhabditis elegans Hypothetical
protein M01F1.3 protein.
Length = 354
Score = 216 bits (527), Expect = 2e-56
Identities = 102/167 (61%), Positives = 129/167 (77%), Gaps = 4/167 (2%)
Frame = +3
Query: 207 LKEGPNLTDFISEDR-PKNWDEYQGKLKREKGESERLRLPPWLKTT--IPTGSK-FNEIK 374
+K+GP+L DFIS + ++Y+GKLK EKG+ RLRLPPWLK +P+ ++ + +K
Sbjct: 21 VKDGPSLQDFISSASVAEAVEKYEGKLKLEKGD-RRLRLPPWLKKEKILPSENENVSRLK 79
Query: 375 QQLRSLKLSTVCEEARCPNIGECWSGGKHGASTATIMLMGDTCTRGCMFCSVKTSRNPPP 554
+QL+ LKL+TVC+EARCPN+GECW G +TATIMLMGDTCTRGC FCSVKT+R PPP
Sbjct: 80 KQLKHLKLATVCQEARCPNLGECWGGSDDSLATATIMLMGDTCTRGCKFCSVKTARAPPP 139
Query: 555 LDPEEPRNTAHAINQWGVGYIVLTSVDRDDLPDGGSLHFAETVKEIK 695
LDP EP NT+ A+ WGV YIVLTSVDRDDLPDGG+ H +TV+ +K
Sbjct: 140 LDPMEPENTSTAVASWGVEYIVLTSVDRDDLPDGGADHLRKTVQLMK 186
>U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily
assigned gene nameprotein 127 protein.
Length = 862
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 174 HSNKLDAIREKLKEGPNLTDFISEDRPKNWDEYQGKLKREK 296
HS+ L I++KLKE N DF++ W E Q L R+K
Sbjct: 237 HSDSLKHIQKKLKESENFRDFVT------WAEAQENLDRQK 271
>U58757-4|AAC47922.3| 580|Caenorhabditis elegans Hypothetical
protein C01B10.4 protein.
Length = 580
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 261 WDEYQGKLKREKGESERLRLPPWLKTTIPTGSKFNEIKQQLRSLKLSTV 407
W+E G+ R + E+ WLK I K E K++L+ + L TV
Sbjct: 473 WNETTGERPRMRKYFEKEVTDYWLKEMIEFDQKVTETKKKLKQISLKTV 521
>Z73973-5|CAA98267.2| 882|Caenorhabditis elegans Hypothetical
protein F25D1.4 protein.
Length = 882
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 129 KKYKVTKHLDFPRYKHSNKLDAIREKLKEGPNLTDFISED 248
KKYK K + PR +++ ++EKL P++ D I D
Sbjct: 345 KKYKKWKKRNIPRCTLRQEIECVQEKLNIRPHIDDSICPD 384
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 219 PNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPTGS--KFNEIKQQLRSL 392
P +T D ++++ + ++ R +GE L +KTT P FN + +
Sbjct: 26 PMMTSSHEHDYTNDYEDPE-EMARSRGEGFSNHL--LIKTTPPPQPHPNFNSYEMSMSQQ 82
Query: 393 KLSTVCEEARCPNIGECWSGGKH 461
+ S ++ P + +CW G H
Sbjct: 83 RRSQQHQQPMAPPLSDCWGSGVH 105
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 60 FYYDSSNYK*VIKIVIAMIRNTIKKYKVTKHLDFPRYKHSNKL--DAIREKLKEGPNLTD 233
+Y + NY+ + I +K+++ KHLD R + L A+ + + PN+
Sbjct: 445 YYLNRQNYE------VVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKH 498
Query: 234 FISEDRPKNWDEYQGKLKR 290
I+ D P + DEY ++ R
Sbjct: 499 VINYDLPSDVDEYVHRIGR 517
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 174 HSNKLDAIREKLKEGPNLTDFISEDRPKNWDEYQ 275
H LDAI + + +G N F+S D PK++ ++
Sbjct: 18 HEMLLDAIDKTIADGKNKIAFVSGDNPKHFITFE 51
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 393 KLSTVCEEARCPNIG--ECWSGGKHGASTATIMLMGDTCTRGCMFCS 527
+ ST C + P G +C + ++A I LM C R C +CS
Sbjct: 95 RTSTTCVDLTNPTTGVSDCTRMASYCNNSAYITLMRQQCPRTCGYCS 141
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
protein ZK675.1 protein.
Length = 1405
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 186 LDAIREKLKE-GPNLTDFISEDRPKNWDEYQGKLKREKGESERLRLPPWLKTTIPT 350
+D +RE K+ G L + +D ++ ++ G+ KRE G+ ++ P +IPT
Sbjct: 385 IDRVREIAKKYGTELEEEKKKDSGYSFFDFLGRKKREAGDQPKMIHPAQPADSIPT 440
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 KKYKVTKHLDFPRYKHSNKLDAIREKLKEGPNLTDFISE-DRPKNWDEYQGKLKREKGES 305
K +K +++D R + K + +KLK+ +L F+S+ D + W E K+ R + E+
Sbjct: 1235 KIHKKARNIDERRGANREKAQEVLKKLKDALSLQQFLSDCDELREWIE--EKMIRAQDET 1292
Query: 306 ER 311
R
Sbjct: 1293 YR 1294
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 KKYKVTKHLDFPRYKHSNKLDAIREKLKEGPNLTDFISE-DRPKNWDEYQGKLKREKGES 305
K +K +++D R + K + +KLK+ +L F+S+ D + W E K+ R + E+
Sbjct: 1235 KIHKKARNIDERRGANREKAQEVLKKLKDALSLQQFLSDCDELREWIE--EKMIRAQDET 1292
Query: 306 ER 311
R
Sbjct: 1293 YR 1294
>U64848-3|AAB04882.1| 323|Caenorhabditis elegans Hypothetical
protein C50E3.7 protein.
Length = 323
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 229 VRFGPSFNFSLIASNLFECLYLGKSKCLVTLYFLI 125
V GP F ++ + LF G C V L+F+I
Sbjct: 233 VDMGPDIGFKVLINRLFFIFPFGSIACYVILFFVI 267
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 KKYKVTKHLDFPRYKHSNKLDAIREKLKEGPNLTDFISE-DRPKNWDEYQGKLKREKGES 305
K +K +++D R + K + +KLK+ +L F+S+ D + W E K+ R + E+
Sbjct: 1235 KIHKKARNIDERRGANREKAQEVLKKLKDALSLQQFLSDCDELREWIE--EKMIRAQDET 1292
Query: 306 ER 311
R
Sbjct: 1293 YR 1294
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 KKYKVTKHLDFPRYKHSNKLDAIREKLKEGPNLTDFISE-DRPKNWDEYQGKLKREKGES 305
K +K +++D R + K + +KLK+ +L F+S+ D + W E K+ R + E+
Sbjct: 1235 KIHKKARNIDERRGANREKAQEVLKKLKDALSLQQFLSDCDELREWIE--EKMIRAQDET 1292
Query: 306 ER 311
R
Sbjct: 1293 YR 1294
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 KKYKVTKHLDFPRYKHSNKLDAIREKLKEGPNLTDFISE-DRPKNWDEYQGKLKREKGES 305
K +K +++D R + K + +KLK+ +L F+S+ D + W E K+ R + E+
Sbjct: 1235 KIHKKARNIDERRGANREKAQEVLKKLKDALSLQQFLSDCDELREWIE--EKMIRAQDET 1292
Query: 306 ER 311
R
Sbjct: 1293 YR 1294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,933
Number of Sequences: 27780
Number of extensions: 364960
Number of successful extensions: 1150
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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