Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11o17
         (716 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542077-1|CAG46874.1|  326|Homo sapiens PEX10 protein.                51   4e-06
BC018198-1|AAH18198.1|  326|Homo sapiens peroxisome biogenesis f...    51   5e-06
BC000543-1|AAH00543.1|  346|Homo sapiens peroxisome biogenesis f...    51   5e-06
AL513477-1|CAI22603.1|  346|Homo sapiens peroxisome biogenesis f...    51   5e-06
AF060502-1|AAC18133.1|  326|Homo sapiens peroxisome assembly pro...    51   5e-06
AB013818-1|BAA87895.1|  326|Homo sapiens peroxisome biogenesis f...    51   5e-06

>CR542077-1|CAG46874.1|  326|Homo sapiens PEX10 protein.
          Length = 326

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
 Frame = +1

Query: 337 MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGS-------KAIPI-SSLLYKSF 492
           MA   A+P EV+RA QKD+ Y   L  +    L    G+       K + + S + Y   
Sbjct: 1   MAPAAARPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 60

Query: 493 TTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLL 606
           TTL   QTLGEEY  I+QVD S   +PS   R   V L
Sbjct: 61  TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTL 98


>BC018198-1|AAH18198.1|  326|Homo sapiens peroxisome biogenesis
           factor 10 protein.
          Length = 326

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = +1

Query: 337 MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGS-------KAIPI-SSLLYKSF 492
           MA   A P EV+RA QKD+ Y   L  +    L    G+       K + + S + Y   
Sbjct: 1   MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 60

Query: 493 TTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLL 606
           TTL   QTLGEEY  I+QVD S   +PS   R   V L
Sbjct: 61  TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTL 98


>BC000543-1|AAH00543.1|  346|Homo sapiens peroxisome biogenesis
           factor 10 protein.
          Length = 346

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = +1

Query: 337 MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGS-------KAIPI-SSLLYKSF 492
           MA   A P EV+RA QKD+ Y   L  +    L    G+       K + + S + Y   
Sbjct: 1   MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 60

Query: 493 TTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLL 606
           TTL   QTLGEEY  I+QVD S   +PS   R   V L
Sbjct: 61  TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTL 98


>AL513477-1|CAI22603.1|  346|Homo sapiens peroxisome biogenesis
           factor 10 protein.
          Length = 346

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = +1

Query: 337 MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGS-------KAIPI-SSLLYKSF 492
           MA   A P EV+RA QKD+ Y   L  +    L    G+       K + + S + Y   
Sbjct: 1   MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 60

Query: 493 TTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLL 606
           TTL   QTLGEEY  I+QVD S   +PS   R   V L
Sbjct: 61  TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTL 98


>AF060502-1|AAC18133.1|  326|Homo sapiens peroxisome assembly
           protein PEX10 protein.
          Length = 326

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = +1

Query: 337 MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGS-------KAIPI-SSLLYKSF 492
           MA   A P EV+RA QKD+ Y   L  +    L    G+       K + + S + Y   
Sbjct: 1   MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 60

Query: 493 TTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLL 606
           TTL   QTLGEEY  I+QVD S   +PS   R   V L
Sbjct: 61  TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTL 98


>AB013818-1|BAA87895.1|  326|Homo sapiens peroxisome biogenesis
           factor (peroxin) 10 protein.
          Length = 326

 Score = 50.8 bits (116), Expect = 5e-06
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
 Frame = +1

Query: 337 MALPVAQPAEVLRAWQKDDQYEKQLADSISKLLPLQHGS-------KAIPI-SSLLYKSF 492
           MA   A P EV+RA QKD+ Y   L  +    L    G+       K + + S + Y   
Sbjct: 1   MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGL 60

Query: 493 TTLKDLQTLGEEYSGIVQVDDSYHKLPSYYARLASVLL 606
           TTL   QTLGEEY  I+QVD S   +PS   R   V L
Sbjct: 61  TTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTL 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,061,726
Number of Sequences: 237096
Number of extensions: 1614341
Number of successful extensions: 7459
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7458
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)