Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11o11
(306 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0900 + 7091970-7092068,7092175-7093131,7093210-7093968,709... 27 2.2
04_04_0621 - 26658204-26658373,26658568-26658649,26658765-26658776 27 2.9
03_02_1003 - 13127251-13128468 27 2.9
02_02_0077 - 6586638-6587165 27 2.9
09_04_0276 - 16306894-16307526,16307556-16308572 27 3.8
08_02_0996 - 23404595-23405596 27 3.8
07_01_0986 - 8314733-8314783,8315895-8318381 27 3.8
11_04_0294 - 15968656-15969074,15970832-15970931 26 5.1
09_03_0001 - 11373469-11373862,11374072-11374264,11374414-113744... 26 5.1
08_02_1024 - 23723560-23723693,23723835-23724041,23724183-237243... 26 5.1
07_03_1214 + 24931142-24932314,24934177-24934434 26 5.1
05_04_0310 + 20114415-20117819 26 5.1
09_04_0587 + 18782870-18783828,18784084-18784265,18785283-187856... 26 6.7
08_01_0175 - 1497700-1498459,1498546-1499939 26 6.7
06_03_0875 - 25584789-25585307,25585424-25585570,25585734-255858... 26 6.7
05_06_0186 - 26207298-26208548,26208743-26208853,26209286-262095... 26 6.7
05_06_0034 + 25082875-25084113 26 6.7
05_04_0243 + 19338682-19339038,19339751-19339867,19340360-193405... 26 6.7
05_03_0155 - 9002049-9002134,9002825-9004139 26 6.7
03_04_0024 + 16556026-16556588,16556757-16556868 26 6.7
02_02_0426 - 10087547-10089054,10090744-10090762 26 6.7
11_01_0722 + 5961348-5961483,5961633-5961901 25 8.9
09_02_0300 - 7073153-7073589,7074058-7074169 25 8.9
07_03_0856 - 22037345-22037665,22037962-22038108,22038201-220389... 25 8.9
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414 25 8.9
02_01_0085 + 610872-611297 25 8.9
>01_01_0900 +
7091970-7092068,7092175-7093131,7093210-7093968,
7094322-7094366
Length = 619
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +2
Query: 14 AVRLNLWSPGCLQMVCCL*SHPGRCRQQWRVNARFRSPKPDP 139
AVR NL + L C GR + WRV AR R+ DP
Sbjct: 220 AVRPNLTTYNILVKAWC---DAGRLEEAWRVVARMRASGADP 258
>04_04_0621 - 26658204-26658373,26658568-26658649,26658765-26658776
Length = 87
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 112 KIPIAQTGPVRKEVKDQSNGDK 177
K+ I GP ++E KD GDK
Sbjct: 65 KVDIISVGPAKEEKKDDKKGDK 86
>03_02_1003 - 13127251-13128468
Length = 405
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 AVRLNLWSPGCLQM-VCCL*SHPGRCRQQWRVNAR 115
A+R +L G + VCCL S G R WRV+ R
Sbjct: 137 ALRADLSPHGPIHAAVCCLASRGGGVRDSWRVDYR 171
>02_02_0077 - 6586638-6587165
Length = 175
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTG 135
LPE + V + DGVL+V +K PP + R + + G
Sbjct: 124 LPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>09_04_0276 - 16306894-16307526,16307556-16308572
Length = 549
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI-AQTGP 138
LP+G +A LS + V + PRKVP V + K+P TGP
Sbjct: 508 LPDGVSA----GELSMEEVFGLSTPRKVPLEVVVKPKLPAHLYTGP 549
>08_02_0996 - 23404595-23405596
Length = 333
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 133 RFGRSESCVHPPLLAAPSWVRLQTTHHLKT 44
R+G V+P L A SW RL T+ L T
Sbjct: 240 RYGMEHPYVNPMALPAASWRRLATSRVLMT 269
>07_01_0986 - 8314733-8314783,8315895-8318381
Length = 845
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 100 PLLAAPSWVRLQTTHHLKTAGTPQIQPYSP 11
PLLA S +R T HL ++ P P SP
Sbjct: 14 PLLAPLSILRTPTPRHLSSSSPPSQPPSSP 43
>11_04_0294 - 15968656-15969074,15970832-15970931
Length = 172
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 172 RRWIGPSPPCARVRFGRSESC 110
+RWI P CAR + G S C
Sbjct: 121 QRWIRPPRSCARAKVGTSLPC 141
>09_03_0001 -
11373469-11373862,11374072-11374264,11374414-11374482,
11374858-11374984,11375223-11375485,11375697-11375785,
11375832-11375909,11376070-11376141,11376234-11376372,
11378857-11379323,11380781-11381345,11382553-11382622
Length = 841
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 100 PLLAAPSWVRLQTTHHLKTAGT 35
P+ A P+W L TT +KT T
Sbjct: 224 PMNADPAWANLSTTSTIKTGST 245
>08_02_1024 -
23723560-23723693,23723835-23724041,23724183-23724327,
23724440-23724615,23724713-23724851
Length = 266
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -3
Query: 166 WIGPSPPCAR----VRFGRSESCVHPPLLAAPSWVRLQTTHHLKTAGTP 32
W+ P PPC+R R ++ H P + + R H TA TP
Sbjct: 143 WVTPPPPCSRKSGLARVVAADEVRHAPCKTSVLFPRSGGNMHAFTAVTP 191
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -3
Query: 160 GPSPPCARVRFGRSESCVHPPLLAAPSWVRLQTTHHLKTAG 38
G S P + + C+H L AA R Q+ HL AG
Sbjct: 19 GSSSPARSLTLDGAVKCLHGRLPAAEILERYQSLEHLSIAG 59
>05_04_0310 + 20114415-20117819
Length = 1134
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 25 ESVESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEVKDQSNGDKA 180
+SV RL +LS KVPP + RK+ I TG V S+ KA
Sbjct: 877 DSVFPRLRKLKLLSCPDLIKVPPFPQSVRKVSIENTGFVSHLKLSSSSSSKA 928
>09_04_0587 +
18782870-18783828,18784084-18784265,18785283-18785629,
18786497-18786739
Length = 576
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 94 AVEGERKIPIAQTGPVRKEVKDQSNG 171
AVEG R++P+ P R+ + Q G
Sbjct: 2 AVEGRRRVPLPLPPPTRRGKQQQQQG 27
>08_01_0175 - 1497700-1498459,1498546-1499939
Length = 717
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 94 LAAPSWVRLQTTHHLKTAGTPQIQPYSPPAK 2
+A W+ + T +L + GT YSPP +
Sbjct: 47 IAGDGWIEITTGSNLPSGGTMGRVAYSPPVQ 77
>06_03_0875 -
25584789-25585307,25585424-25585570,25585734-25585897,
25586015-25586172,25586536-25586904,25586998-25587209,
25587439-25588059,25588561-25588699,25588968-25589044,
25589120-25589800,25590641-25590889
Length = 1111
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 88 PPAVEGERKIPIAQTGPVRKEVKDQSNGD 174
PPA E E P + T V +E +++ GD
Sbjct: 9 PPAAEQEEARPPSSTAAVAEEDEEEEEGD 37
>05_06_0186 -
26207298-26208548,26208743-26208853,26209286-26209507,
26209623-26209658
Length = 539
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 91 PAVEGERKIPIAQTGPVRKEVKDQSNGD 174
P EG RK I TGP + +++GD
Sbjct: 311 PISEGSRKEEIPSTGPTQSGKPSEASGD 338
>05_06_0034 + 25082875-25084113
Length = 412
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 134 PVWAIGILRSPSTAGGTFLGAITDNTPSEDSRDSTDSAVQP 12
P+ A+G + SP+ + ++T ++PS S S+ S P
Sbjct: 129 PIQALGQILSPANSASVLAASVT-SSPSSSSSSSSSSPPLP 168
>05_04_0243 +
19338682-19339038,19339751-19339867,19340360-19340596,
19340926-19341078,19341188-19341263,19341600-19341626,
19342188-19342252,19342830-19342904,19343306-19343449,
19343550-19343600
Length = 433
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 49 SDGVLSVIAPRKVPPAVEGERKIPIAQTG 135
SDG S++ R PP+V G IP + G
Sbjct: 179 SDGAPSLVQTRTPPPSVIGLPNIPTSTNG 207
>05_03_0155 - 9002049-9002134,9002825-9004139
Length = 466
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -3
Query: 178 PCRRWIGPSPPCAR-VRFGRSESCVHPPLLAAPSWVRLQTTHHLKTAGTP 32
P RR + + A VR S + P WV + + HH A TP
Sbjct: 18 PVRRALSAAAAAAAPVRRALSAAAADADASRHPGWVMIHSIHHATEARTP 67
>03_04_0024 + 16556026-16556588,16556757-16556868
Length = 224
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 157 PSPPCARVRFGRSESCVHPPLLAAPSWVR 71
PSP A + S S + PP PSW+R
Sbjct: 66 PSPSVAAIFSFSSSSLIFPPPPWRPSWLR 94
>02_02_0426 - 10087547-10089054,10090744-10090762
Length = 508
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 157 PSPPCARVRFGRSESCVHPP 98
P PPCARV E C H P
Sbjct: 449 PDPPCARV--ATPEPCFHSP 466
>11_01_0722 + 5961348-5961483,5961633-5961901
Length = 134
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -3
Query: 121 SESCVHPPLLAAPSWVRLQTTHHLKTAGTPQIQPYS--PPA 5
SES + P L P L TTH P PYS PPA
Sbjct: 68 SESALPPRQLDRPDSSGLPTTHQSWIYHEPVAMPYSTAPPA 108
>09_02_0300 - 7073153-7073589,7074058-7074169
Length = 182
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 34 ESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEVKDQ 162
E+ LSS+ + APR +P +EG+ + I + VR +K Q
Sbjct: 141 EAELSSEVIRINTAPRVIPCHLEGD-NVGILYSPTVRANLKGQ 182
>07_03_0856 -
22037345-22037665,22037962-22038108,22038201-22038978,
22039092-22039384,22039663-22039758
Length = 544
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 99 HCWRHLPGCDYRQHTI*RQPGLHRFSR 19
H W+ +P + QH I Q L RF R
Sbjct: 77 HLWKSVPKLRFSQHDIVPQTELSRFLR 103
>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
Length = 520
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 6 AGGLYG*ICGVPAVFRWCVVCNRTQEGAASSG 101
AGG G G V RW VVC + AA G
Sbjct: 90 AGGGGGGGAGGEVVERWTVVCEPWPDAAAGEG 121
>02_01_0085 + 610872-611297
Length = 141
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 139 RVRFGRSESCVHPPLLAAPSWVRLQTTHHLKTAGTPQIQPYSPPAK 2
R+R R SC P+ AAP+ R ++T G + +P++PP +
Sbjct: 32 RIRH-RLASCPQLPITAAPAVTRARSTPDSCAWGAER-RPHAPPPR 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,109,335
Number of Sequences: 37544
Number of extensions: 188477
Number of successful extensions: 638
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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