Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11o11
(306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 1... 31 0.50
AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 1... 31 0.50
AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 1... 31 0.50
S45630-1|AAB23453.1| 175|Homo sapiens alpha B-crystallin protein. 31 0.87
M28638-1|AAA52104.1| 175|Homo sapiens protein ( Human alpha-B-c... 31 0.87
M24906-1|AAA60267.1| 69|Homo sapiens alpha-B-crystallin protein. 31 0.87
BT006770-1|AAP35416.1| 175|Homo sapiens crystallin, alpha B pro... 31 0.87
BC007008-1|AAH07008.1| 175|Homo sapiens crystallin, alpha B pro... 31 0.87
AF007162-1|AAC19161.1| 194|Homo sapiens unknown protein. 31 0.87
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 27 8.1
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 27 8.1
BC127731-1|AAI27732.1| 119|Homo sapiens LOC400831 protein protein. 27 8.1
BC127730-1|AAI27731.1| 119|Homo sapiens LOC400831 protein protein. 27 8.1
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 27 8.1
BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein. 27 8.1
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 27 8.1
AL031665-8|CAI21759.1| 122|Homo sapiens novel protein protein. 27 8.1
AF332233-1|AAK13483.1| 124|Homo sapiens transcript Y 7 protein. 27 8.1
AF332232-1|AAK13482.1| 124|Homo sapiens transcript Y 7 protein. 27 8.1
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 27 8.1
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 27 8.1
>BC010626-1|AAH10626.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -3
Query: 178 PCRRWIGPSPPCARVRFGRSESCVH-PPLLAAP--SWVRLQTTHHLKTAGTPQIQPYSPP 8
PC + P+PPC + S C H PL P W L HHL P+ PP
Sbjct: 347 PCPCLMAPAPPCHALPPLYSCPCCHICPLCRVPLAHWACLPGEHHLPQVLDPEASGGRPP 406
Query: 7 A 5
+
Sbjct: 407 S 407
>AL137850-6|CAI15901.1| 646|Homo sapiens kinesin family member 12
protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -3
Query: 178 PCRRWIGPSPPCARVRFGRSESCVH-PPLLAAP--SWVRLQTTHHLKTAGTPQIQPYSPP 8
PC + P+PPC + S C H PL P W L HHL P+ PP
Sbjct: 480 PCPCLMAPAPPCHALPPLYSCPCCHICPLCRVPLAHWACLPGEHHLPQVLDPEASGGRPP 539
Query: 7 A 5
+
Sbjct: 540 S 540
>AL137850-5|CAI15900.1| 513|Homo sapiens kinesin family member 12
protein.
Length = 513
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -3
Query: 178 PCRRWIGPSPPCARVRFGRSESCVH-PPLLAAP--SWVRLQTTHHLKTAGTPQIQPYSPP 8
PC + P+PPC + S C H PL P W L HHL P+ PP
Sbjct: 347 PCPCLMAPAPPCHALPPLYSCPCCHICPLCRVPLAHWACLPGEHHLPQVLDPEASGGRPP 406
Query: 7 A 5
+
Sbjct: 407 S 407
>S45630-1|AAB23453.1| 175|Homo sapiens alpha B-crystallin protein.
Length = 175
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEG-ERKIPIAQ 129
+P ++ S LSSDGVL+V PRK V G ER IPI +
Sbjct: 124 IPADVDPLTITSSLSSDGVLTVNGPRK---QVSGPERTIPITR 163
>M28638-1|AAA52104.1| 175|Homo sapiens protein ( Human
alpha-B-crystallin gene, 5' end. ).
Length = 175
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEG-ERKIPIAQ 129
+P ++ S LSSDGVL+V PRK V G ER IPI +
Sbjct: 124 IPADVDPLTITSSLSSDGVLTVNGPRK---QVSGPERTIPITR 163
>M24906-1|AAA60267.1| 69|Homo sapiens alpha-B-crystallin protein.
Length = 69
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEG-ERKIPIAQ 129
+P ++ S LSSDGVL+V PRK V G ER IPI +
Sbjct: 18 IPADVDPLTITSSLSSDGVLTVNGPRK---QVSGPERTIPITR 57
>BT006770-1|AAP35416.1| 175|Homo sapiens crystallin, alpha B
protein.
Length = 175
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEG-ERKIPIAQ 129
+P ++ S LSSDGVL+V PRK V G ER IPI +
Sbjct: 124 IPADVDPLTITSSLSSDGVLTVNGPRK---QVSGPERTIPITR 163
>BC007008-1|AAH07008.1| 175|Homo sapiens crystallin, alpha B
protein.
Length = 175
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEG-ERKIPIAQ 129
+P ++ S LSSDGVL+V PRK V G ER IPI +
Sbjct: 124 IPADVDPLTITSSLSSDGVLTVNGPRK---QVSGPERTIPITR 163
>AF007162-1|AAC19161.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 4 LPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEG-ERKIPIAQ 129
+P ++ S LSSDGVL+V PRK V G ER IPI +
Sbjct: 124 IPADVDPLTITSSLSSDGVLTVNGPRK---QVSGPERTIPITR 163
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 166 WIGPSPPCARVRFGRSESC 110
W+ P+P C + F R SC
Sbjct: 355 WVCPNPSCGNMNFARRNSC 373
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 166 WIGPSPPCARVRFGRSESC 110
W+ P+P C + F R SC
Sbjct: 358 WVCPNPSCGNMNFARRNSC 376
>BC127731-1|AAI27732.1| 119|Homo sapiens LOC400831 protein protein.
Length = 119
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 114 DSDRPNRTRAQGGEGPIQRRQGLSRQQCQHKCS 212
DS R+ GG PI+ R G + CQ CS
Sbjct: 69 DSAHWEDARSSGGTSPIRARAGSEGRGCQPVCS 101
>BC127730-1|AAI27731.1| 119|Homo sapiens LOC400831 protein protein.
Length = 119
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 114 DSDRPNRTRAQGGEGPIQRRQGLSRQQCQHKCS 212
DS R+ GG PI+ R G + CQ CS
Sbjct: 69 DSAHWEDARSSGGTSPIRARAGSEGRGCQPVCS 101
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 166 WIGPSPPCARVRFGRSESC 110
W+ P+P C + F R SC
Sbjct: 358 WVCPNPSCGNMNFARRNSC 376
>BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein.
Length = 583
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 39 PAVFRWCVVCNRTQEGAASSGG*TQD-SDRPNRTRAQGGEGPIQRRQGLSRQQCQ 200
P R C R + A+ G T+ S R A+GG GP +RR SR++ Q
Sbjct: 20 PRALRPAAGCVRPRSPASRLGAPTRPRSGAGTRAGAEGGPGPGRRRGRSSRRRQQ 74
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 166 WIGPSPPCARVRFGRSESC 110
W+ P+P C + F R SC
Sbjct: 355 WVCPNPSCGNMNFARRNSC 373
>AL031665-8|CAI21759.1| 122|Homo sapiens novel protein protein.
Length = 122
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 114 DSDRPNRTRAQGGEGPIQRRQGLSRQQCQHKCS 212
DS R+ GG PI+ R G + CQ CS
Sbjct: 72 DSAHWEDARSSGGTSPIRARAGSEGRGCQPVCS 104
>AF332233-1|AAK13483.1| 124|Homo sapiens transcript Y 7 protein.
Length = 124
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 145 CARVRFGRSESCVHPPLLAAPSWVRLQ 65
C +R R ES PL +PSW R Q
Sbjct: 97 CGSLREDRQESTTKAPLWRSPSWPRSQ 123
>AF332232-1|AAK13482.1| 124|Homo sapiens transcript Y 7 protein.
Length = 124
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 145 CARVRFGRSESCVHPPLLAAPSWVRLQ 65
C +R R ES PL +PSW R Q
Sbjct: 97 CGSLREDRQESTTKAPLWRSPSWPRSQ 123
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 166 WIGPSPPCARVRFGRSESC 110
W+ P+P C + F R SC
Sbjct: 355 WVCPNPSCGNMNFARRNSC 373
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 166 WIGPSPPCARVRFGRSESC 110
W+ P+P C + F R SC
Sbjct: 358 WVCPNPSCGNMNFARRNSC 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,451,958
Number of Sequences: 237096
Number of extensions: 984787
Number of successful extensions: 2352
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2347
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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