Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11o10
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 128 4e-30
06_01_0841 - 6379999-6380040,6380641-6380760,6380863-6380964,638... 80 2e-15
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177... 63 2e-10
11_01_0231 - 1791754-1791947,1792178-1792253,1792352-1792483,179... 50 2e-10
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 60 2e-09
12_01_0228 - 1726856-1727049,1727280-1727355,1727454-1727585,172... 51 8e-07
11_01_0309 + 2312786-2313211,2313311-2313527,2313613-2313731,231... 41 9e-04
01_01_0965 - 7589659-7589785,7590188-7590317,7590339-7590438,759... 40 0.002
04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680 33 0.31
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 29 3.8
02_04_0295 + 21682029-21683534 29 3.8
06_01_0172 + 1362101-1363708 29 5.0
04_04_0207 + 23602065-23604315,23604611-23605116 29 5.0
09_02_0258 - 6380702-6380758,6380767-6380794,6381352-6381467,638... 28 6.6
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 128 bits (309), Expect = 4e-30
Identities = 92/246 (37%), Positives = 125/246 (50%), Gaps = 27/246 (10%)
Frame = +2
Query: 59 KMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTS 238
K ++ +++IRHGES WN+KNLF G D L+ KG EA+ AGK + D+ +TS
Sbjct: 75 KKSSESALILIRHGESLWNEKNLFTGCVDVPLTPKGVDEAIEAGKRIC--NIPVDVIYTS 132
Query: 239 VL----------------KRAQITLNS-----------ILKEIGQPDIPVEKTWRLNERH 337
L K+ I ++S +E + IPV W+LNER
Sbjct: 133 SLIRAQMTAMLAMMQHRRKKVPIVVHSESEQAHRWSKIYSEETKKQSIPVITAWQLNERM 192
Query: 338 YGGLTGLNKAETAAKYGEAQVQIWRRSFDVPPPAMEKDHPYYDTIVNDPRYAADPKPEEF 517
YG L GLNK ETA ++G+ QV WRRS YD P P
Sbjct: 193 YGELQGLNKQETADRFGKEQVHEWRRS--------------YDI----------PPPNG- 227
Query: 518 PMYESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKHLDDLSDAAIMELNL 697
ESL++ ER + Y+ + IVPQ+ GK ++IAAHGNSLR I+ HLD L+ ++ L L
Sbjct: 228 ---ESLEMCAERAVAYFKDQIVPQLVAGKHVMIAAHGNSLRSIIMHLDKLTSQEVISLEL 284
Query: 698 PTGIPL 715
TGIP+
Sbjct: 285 STGIPM 290
>06_01_0841 -
6379999-6380040,6380641-6380760,6380863-6380964,
6381146-6381302,6381480-6381511
Length = 150
Score = 80.2 bits (189), Expect = 2e-15
Identities = 52/129 (40%), Positives = 67/129 (51%)
Frame = +2
Query: 329 ERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDVPPPAMEKDHPYYDTIVNDPRYAADPKP 508
E YG L GLNK ETA ++G QV WRRS YD P P
Sbjct: 9 EVRYGELQGLNKQETADRFGNEQVHKWRRS--------------YDI----------PPP 44
Query: 509 EEFPMYESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKHLDDLSDAAIME 688
ESL++ ER + Y+ +VPQ+ GK ++IAAHGNSLR I+ LD L+ ++
Sbjct: 45 NG----ESLEMCAERAVAYFKEHVVPQLTAGKHVMIAAHGNSLRSIIMQLDKLTSQEVIS 100
Query: 689 LNLPTGIPL 715
L L TGIP+
Sbjct: 101 LELSTGIPM 109
>11_01_0229 -
1771701-1774164,1774694-1774847,1774980-1775055,
1775439-1775477,1778516-1778674,1778741-1778851,
1779014-1779064,1779173-1779256
Length = 1045
Score = 63.3 bits (147), Expect = 2e-10
Identities = 57/195 (29%), Positives = 89/195 (45%)
Frame = +2
Query: 77 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 256
++V++RHGE+ WN + G D +L++ G+Q+AV + L E I ++S LKRA
Sbjct: 10 ELVVVRHGETSWNASRIVQGQMDPELNEIGKQQAVVVARRLAREARPAAI-YSSDLKRAA 68
Query: 257 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDVPPP 436
T I K ++ + T L ERH G L GL + K V +F+V
Sbjct: 69 ETAEIIAKACDVSNLML--TEALRERHMGYLQGLMWDDAVNK--SPSVFKGFANFEVKNG 124
Query: 437 AMEKDHPYYDTIVNDPRYAADPKPEEFPMYESLKLTIERTLPYWNNVIVPQIKEGKKIII 616
D + + +Y K E ESL ER + Y N V I G+++I+
Sbjct: 125 LDFDDRNHELPQIYAQKYQWH-KNEGGG--ESLNQLSERCISYLNKVAQNHI--GERVIV 179
Query: 617 AAHGNSLRGIVKHLD 661
HG ++ + +H D
Sbjct: 180 VGHGAAILELCRHTD 194
>11_01_0231 -
1791754-1791947,1792178-1792253,1792352-1792483,
1792563-1792673,1792790-1792840,1793012-1793122
Length = 224
Score = 50.4 bits (115), Expect(2) = 2e-10
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +2
Query: 77 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 256
++V++RHGE+ N + G D +L++ GRQ+AV + L E + ++S LKRA
Sbjct: 19 EVVVVRHGETSANALCIIQGQTDIELNEAGRQQAVMVARRLAKEAKPVAV-YSSDLKRAA 77
Query: 257 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAK 382
T +I ++ + L ERH G L GL K E A +
Sbjct: 78 ETAQTIATACNVSNLVLSPA--LRERHMGDLHGL-KFEDAVR 116
Score = 32.7 bits (71), Expect(2) = 2e-10
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 488 YAADPKPEEFPMY-ESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKHLDD 664
++++ + +E P ESL ER + Y N + +G+++I+ +HG S+ + +H D
Sbjct: 125 FSSEDRSQEIPGGGESLDQLSERCVSYLNTIAGKH--KGERVIVVSHGASIEELCRHADP 182
Query: 665 LS 670
S
Sbjct: 183 TS 184
>12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 59.7 bits (138), Expect = 2e-09
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Frame = +2
Query: 77 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 256
++V++RHGE+ WN + G D +L++ G+Q+AV + L + I ++S LKRA
Sbjct: 575 ELVVVRHGETSWNSSRIVQGQMDPELNEIGKQQAVVVARRLARKARPAAI-YSSDLKRAA 633
Query: 257 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDVPPP 436
T+ I K ++ + + L ERH G L GL W + + P
Sbjct: 634 ETVKIIAKVCDVSNLVLIEA--LRERHMGYLQGLT---------------WDDAMN-KSP 675
Query: 437 AMEKDHPYYDTIVNDPRYAADPKPEEFP-MYESLKLTIERTLPYWNNVIVPQIKEGKKII 613
+ K ++ + N + D + EFP ESL E+ + Y N V I G+++I
Sbjct: 676 GVFKGFANFE-VKNGLDF--DGRNHEFPDGGESLNQLSEQGISYLNKVAQNHI--GERVI 730
Query: 614 IAAHGNSLRGIVKHLD 661
+ HG ++ + +H D
Sbjct: 731 VVGHGAAILELCRHTD 746
>12_01_0228 -
1726856-1727049,1727280-1727355,1727454-1727585,
1727665-1727775,1727892-1727942,1728114-1728275,
1729558-1729584
Length = 250
Score = 51.2 bits (117), Expect = 8e-07
Identities = 55/198 (27%), Positives = 88/198 (44%)
Frame = +2
Query: 77 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 256
++V++RHGE+ N + G D +L++ GRQ+AV + L E + ++S LKRA
Sbjct: 45 EVVVVRHGETSANALCIIQGQMDIELNEAGRQQAVMVARRLAKEAKPVAV-YSSDLKRAA 103
Query: 257 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRSFDVPPP 436
T +I ++ + L ERH G L GL K+ +A RS P
Sbjct: 104 ETAQTIATACNVSNLVLSPA--LRERHMGDLHGL-------KFDDAV-----RS---KPD 146
Query: 437 AMEKDHPYYDTIVNDPRYAADPKPEEFPMYESLKLTIERTLPYWNNVIVPQIKEGKKIII 616
A Y ++ R P E SL ER + Y N + +G+++I+
Sbjct: 147 A-------YKAFSSEDRSQEIPGGGE-----SLDQLSERCVSYLNTIAGKH--KGERVIV 192
Query: 617 AAHGNSLRGIVKHLDDLS 670
+HG S+ + +H D S
Sbjct: 193 VSHGASIEELCRHADPTS 210
>11_01_0309 +
2312786-2313211,2313311-2313527,2313613-2313731,
2313921-2314019,2314498-2314551,2314635-2314733,
2314838-2314945,2315418-2315694,2316051-2316160,
2316425-2316493,2316608-2316714,2316754-2316792,
2317126-2317171,2317593-2317619
Length = 598
Score = 41.1 bits (92), Expect = 9e-04
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Frame = +2
Query: 77 KIVMIRHGESEWNQKNLFCGWFDAD-LSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRA 253
++V++RHG+S WN + G D L+ KG +A + L ++ FD TS L R+
Sbjct: 55 RVVLVRHGQSTWNAEGRIQGSSDISVLTPKGESQAETSRLMLLSD--SFDACFTSPLARS 112
Query: 254 QITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAKYGEAQVQIWRRS 418
+ T I + IP L E GL K E +YG Q W+++
Sbjct: 113 RRTAEIIWADRDDDLIPDSD---LREIDLYSFQGLLKNEGKERYGVIYRQ-WQKN 163
>01_01_0965 -
7589659-7589785,7590188-7590317,7590339-7590438,
7590524-7590643,7590910-7591145,7591585-7591714
Length = 280
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 50 LSNKM-PAKYKIVMIRHGESEWNQKNLFCGWFDAD-LSDKGRQEAVAAGKALKAEGYQFD 223
L+N+M KI ++RHG S WN ++ G + L++ G ++A AL +FD
Sbjct: 94 LTNEMLTLSKKITLVRHGLSTWNAESRVQGSSNLSVLTETGAKQAEKCRDAL--ANMKFD 151
Query: 224 IAHTSVLKRAQITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKA 367
+ +S + RA+ T I K +P I ++ L E H L G+ A
Sbjct: 152 VCFSSPISRAKSTAEIIWKGKEEPLIFLDS---LKEAHLFFLEGMTNA 196
>04_04_0175 - 23307507-23308688,23308962-23309647,23310662-23310680
Length = 628
Score = 32.7 bits (71), Expect = 0.31
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Frame = +2
Query: 260 TLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLNKAETAAKYGEAQV---QIWRRSFDVP 430
+L +I+ ++ PVEKT ++ YG L G N ET E + S
Sbjct: 310 SLPTIVDDVYSVPCPVEKTDSFSDIVYGALRGFNFLETGESIAEDSTLDSVVENSSMTDV 369
Query: 431 PPAMEKDHPYYDTIVNDPRYAADPKPEEFPMYESLKLTIERTL 559
+ EKD D I++D R + +SL ++R L
Sbjct: 370 QASEEKDEARSDDILSDERKIPVDQRSPVENSDSLSDPVDRAL 412
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 161 KGRQEAVAAGKALKAEG-YQFDIA-----HTSVLKRAQITLNSILKEIGQPDIPVEKTWR 322
KG +EA A KA + E + +IA +++++R L + KEI D + W+
Sbjct: 624 KGEEEARRAYKAAREESDHAAEIAAGEKVSSALIERVDAMLQKLEKEIDDVDARIGNRWQ 683
Query: 323 LNERHYGGLTGLNKAETAAKY 385
L + G ++ AA Y
Sbjct: 684 LLDSDRDGKVTPDEVAAAANY 704
>02_04_0295 + 21682029-21683534
Length = 501
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 558 RVLSIVSFRLSYIGNSSGFGSAAYLGSLTMVS*YG*SFSMAGGGTSK 418
+V IV++ S G FG A Y G L +VS S +MAG G+ +
Sbjct: 160 KVRDIVAYFRSRAGEEVVFGEAIYSGVLNLVSSSFFSVNMAGVGSEE 206
>06_01_0172 + 1362101-1363708
Length = 535
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 415 AAPDLNLSLPVFGSCLSLVQSSEATIMPLVQS 320
AAP L SLPVF + LS + +++ ++P V S
Sbjct: 83 AAPPLPPSLPVFAAVLSRLPAADPALLPPVLS 114
>04_04_0207 + 23602065-23604315,23604611-23605116
Length = 918
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/69 (21%), Positives = 28/69 (40%)
Frame = +2
Query: 104 SEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQITLNSILKE 283
S W++ +C W + G VA G +L+ G DIA + + + S+
Sbjct: 59 STWSRSTPYCNWSHVTCTAGGGGGGVAVGLSLQGLGLSGDIAAEPLCRVPGLAALSLASN 118
Query: 284 IGQPDIPVE 310
+P++
Sbjct: 119 TFNQTVPLQ 127
>09_02_0258 -
6380702-6380758,6380767-6380794,6381352-6381467,
6382318-6382435,6382542-6382721,6383214-6383313,
6384315-6384618
Length = 300
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 65 PAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVL 244
P + +++++RHGES + D LS GR A++ L+ G+ ++ S
Sbjct: 80 PPRRRLILLRHGESAAGGR--LTRDHDRPLSKAGRAAAISVSNKLQQMGWIPELVLCSDA 137
Query: 245 KRAQITL 265
R + TL
Sbjct: 138 TRTKETL 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,301,701
Number of Sequences: 37544
Number of extensions: 428233
Number of successful extensions: 1207
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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