Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11o09
         (569 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17 p...    33   0.71 
BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17 p...    33   0.71 

>BC132918-1|AAI32919.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 33.1 bits (72), Expect = 0.71
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 300 PTEIYHKHVGMLPNYAGHVPGCVFRFGKTYGNDTRDA--KRWLRGDFT 437
           P+   +   G++P Y G +P     +  T+GN TR A  K W + + T
Sbjct: 269 PSNHIYSSQGLIPFYMGFIPAMQDNYALTFGNSTRRAYWKEWAKRNHT 316


>BC132916-1|AAI32917.1|  317|Homo sapiens similar to 4931415M17
           protein protein.
          Length = 317

 Score = 33.1 bits (72), Expect = 0.71
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 300 PTEIYHKHVGMLPNYAGHVPGCVFRFGKTYGNDTRDA--KRWLRGDFT 437
           P+   +   G++P Y G +P     +  T+GN TR A  K W + + T
Sbjct: 269 PSNHIYSSQGLIPFYMGFIPAMQDNYALTFGNSTRRAYWKEWAKRNHT 316


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,844,514
Number of Sequences: 237096
Number of extensions: 1541414
Number of successful extensions: 3234
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3231
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)