BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11n20
(568 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 6.5
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 21 8.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.6
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.6
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 8.6
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 407 VLKRRSISNDFRVPFLLSS 351
VLKR SI N FL+ S
Sbjct: 301 VLKRESIHNSSNARFLMDS 319
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 559 KCIYLFHQYLLTWAFTVT 506
+CIYLF +L ++ VT
Sbjct: 6 RCIYLFLSVILITSYFVT 23
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 150 AYDDQKTRRKYKKTPK 197
+Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 150 AYDDQKTRRKYKKTPK 197
+Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 150 AYDDQKTRRKYKKTPK 197
+Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 150 AYDDQKTRRKYKKTPK 197
+Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 150 AYDDQKTRRKYKKTPK 197
+Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +3
Query: 150 AYDDQKTRRKYKKTPK 197
+Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 49 LYKNKREYRKYRE 61
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 282 LYKNKREYRKYRE 294
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 86 LSRNKREIHKYRK 48
L +NKRE KYR+
Sbjct: 282 LYKNKREYRKYRE 294
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 426 RRSLESDNLFVIRDLDEIEFLGKDN 500
R +++SDN+F +L ++ L + N
Sbjct: 45 RNAIQSDNVFANCELQKLRLLLQGN 69
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,696
Number of Sequences: 438
Number of extensions: 2462
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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