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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11n16
         (602 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |...    34   0.018
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc...    33   0.042
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    29   0.52 
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    29   0.69 
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce...    28   0.91 
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|...    27   1.6  
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    27   1.6  
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce...    27   1.6  
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy...    27   2.1  
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch...    27   2.1  
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|...    27   2.8  
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo...    27   2.8  
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos...    26   3.7  
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    26   3.7  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    26   3.7  
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po...    26   3.7  
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha...    26   3.7  
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz...    26   3.7  
SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces ...    26   4.9  
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi...    26   4.9  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    26   4.9  
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha...    25   6.4  
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb...    25   6.4  
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc...    25   6.4  
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    25   8.5  
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|...    25   8.5  
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch...    25   8.5  
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy...    25   8.5  
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    25   8.5  

>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 652

 Score = 33.9 bits (74), Expect = 0.018
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 238 QRSFISIHSTD-QPCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNA 414
           +R  + + STD +   A V   SN  DC +  L   E+F  T E+ ++N      R+ +A
Sbjct: 531 ERKNVHLKSTDIRGFHAKVPQQSNFSDCGIYALHFVELFLETPEQVIANTLDKSLRRTDA 590

Query: 415 KN 420
           KN
Sbjct: 591 KN 592


>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1085

 Score = 32.7 bits (71), Expect = 0.042
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +1

Query: 301  SNLDDCNVEVLSLNEVFPSTSEESLSNDDSP---VRRKKNAKNKTVQNVQPDDAAKSTYV 471
            S+L+D N  +   NE+  + SEE L N  S    V   K    KTV+N      +KS  +
Sbjct: 826  SHLNDTNSNIRKANEIMNNRSEEFLRNAASQAEIVGANKERIQKTVENGSQLLDSKSKAI 885

Query: 472  PTNSKS 489
             +NS+S
Sbjct: 886  HSNSRS 891


>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 515

 Score = 29.1 bits (62), Expect = 0.52
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
 Frame = +1

Query: 127 QGNEVKGEMEGLESCIYAVTVSKKPSTTNDGAGFCSGQRSFISIHSTDQ----PCLADVD 294
           +G  ++G +  LES + +VT +      N  +  CSG  SFI +    Q     CLA +D
Sbjct: 65  EGFRIEGTL--LESLVESVTSASNYPKVNAFSLMCSGIPSFIWVEDDKQYALWACLAQLD 122

Query: 295 TASNLDDCNVEVLSLNEVFPS--TSEESLSNDDSPVRRKKNA 414
           + S   +  +E+     + P    S E   N ++   R++N+
Sbjct: 123 SYS-YPNHKLEIHVYKHILPDLPQSSEVDRNSETEGTREENS 163


>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 751

 Score = 28.7 bits (61), Expect = 0.69
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 406 KNAKNK-TVQNVQPDDAAKSTYVPTNSKSSTGSR-PKETPER 525
           KN+K K T +    D A  S   PT S +S   + PKETPER
Sbjct: 451 KNSKAKYTAKQPSYDRAGSSLASPTKSSASPLVKAPKETPER 492


>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1067

 Score = 28.3 bits (60), Expect = 0.91
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 340 NEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKS 462
           NE  PST ++   ++D   +  K++ NKT +      A+KS
Sbjct: 83  NESLPSTDKKKKKDNDDFKQNLKSSSNKTEEKYSATQASKS 123


>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 643

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 238 QRSFISIHSTDQPCLADVDT--ASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKN 411
           +RS + I S  +    DV+   A   D+ N EVLS NE  P  SEE +     P    + 
Sbjct: 474 KRSGVEIKSNLEAKSNDVEEYDAFYKDEINCEVLSWNEQNPKASEERVVGYSLPSVNLQQ 533

Query: 412 AKNKTVQ 432
             N+ ++
Sbjct: 534 ISNQQLK 540


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 15/63 (23%), Positives = 31/63 (49%)
 Frame = +1

Query: 307 LDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSK 486
           LD+ + +    +E+   +   ++S++ +  ++KK  KNK  +N   DD ++    P   K
Sbjct: 28  LDNTSQDSPQNDELAEKSENLAVSSEKTTSKKKKGKKNKGNKNQVSDDESQELESPQGPK 87

Query: 487 SST 495
             T
Sbjct: 88  ELT 90


>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 522

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 1/116 (0%)
 Frame = +1

Query: 256 IHSTDQPCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQN 435
           I  +D P + DVDT S  +       ++++   S   +  +    P     N +++   +
Sbjct: 345 ISRSDSPIVYDVDTHSEDNASTASSEAISQSMRSFQPQPNTGSPFPRFTSTNTEDEQESD 404

Query: 436 VQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS-DYDLPKNTLHVIGSNPGEP 600
           +   DA  ST V  N  +     P      +   YS    LP  ++  +G    +P
Sbjct: 405 IPQSDANDST-VNLNQPNYANLTPTPQVSPKRPTYSRSSPLPSASVPALGDGSPDP 459


>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 541

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -2

Query: 403 SFERENRRWTNSPLMSMETLHSD*ALPHCSRPDLKLYQHPLNTAGLLSEC**TIFDQNKN 224
           +FE+ N +W   PL  +   H    +   S  DL   +  LN+   +  C   + D  K 
Sbjct: 72  TFEKYNAKWQTGPLSCVSVFHKFVVI--ASERDLA--RKILNSPSYVQPC---VVDAGKK 124

Query: 223 QLHHSLWM 200
            L H+ W+
Sbjct: 125 ILKHTNWV 132


>SPBC25B2.07c |mug164||microtubule-associated
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 501

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 352 PSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGS 501
           PSTS   LSN+   + ++ +    ++ + +      S +V T +K ST S
Sbjct: 111 PSTSLARLSNNAPRIPKEASLHENSISSKESPSVTTSKHVATITKPSTSS 160


>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1402

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +1

Query: 415  KNKTVQNVQ--PDDAAKSTYVPTNSKSSTGSRPKETPER 525
            + + ++N +  PD A+ +  VP N+ SS+ + PK+ P R
Sbjct: 1307 EEEEIENAEQSPDWASSTLQVPFNASSSSLATPKKEPLR 1345


>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 689

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 421 KTVQNVQPDDAAKSTYVPTNSKSSTGSRPKET 516
           K V  V PD+    TY+  NS SS    P +T
Sbjct: 581 KPVVIVNPDENGLRTYLTKNSGSSFNGNPNDT 612


>SPAC15A10.13 |ppk3||serine/threonine protein kinase
           Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 637

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 373 LSNDDSPVRRKKNAKNKTVQNVQ 441
           L ND + ++ KKN+K++ V N +
Sbjct: 574 LKNDTTEIKEKKNSKSRVVGNTE 596


>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 527

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 472 PTNSKSSTGSRPKETP 519
           PT+SKS+T S PK +P
Sbjct: 76  PTDSKSTTSSAPKNSP 91


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1016

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 166 SCIYAVTVSKKPSTTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLDDCN 321
           SC   ++ +  P+TT+  +G C+G     S++  D   L  +    +  +CN
Sbjct: 772 SCTLPISYTSTPTTTSI-SGTCNGATFDASLYVCDGTVLCPIVNGVSYQNCN 822


>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 467

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = -2

Query: 400 FERENRRWTNSPLMSMETLHSD*ALPHCSRPDLKLYQHPLNTAGLLS 260
           FER ++++ +  L+ M+  H D +LP  + P +   ++  +T  + S
Sbjct: 336 FERLSKQFPHHSLLLMDVCHVDKSLPGINAPSVLSMENDFSTKKMSS 382


>SPCC1235.05c |fft2||fun thirty related protein
           Fft2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1284

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +2

Query: 356 RHQRRVCPTT-ILPFEGKRTPRTKLCKMYSQMTPRNRL---TYQQTANPRQDPDQKKHQN 523
           R   R CP+  + P+ G +  R  + +   +   +  +   TYQ   N ++D    KHQN
Sbjct: 615 RELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDILVTTYQLATNNKEDRSFLKHQN 674

Query: 524 DKPRSTQIMIYRKIHY 571
                  + +Y + HY
Sbjct: 675 -----FDVCVYDEGHY 685


>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 665

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 187 VSKKPSTTNDGAGF---CSGQRSFISIHSTDQPCLADVDTAS 303
           +S +P+TTN  +      +G R  IS  + D P L +VDT S
Sbjct: 228 ISIRPNTTNYRSSIQENSNGNRDSISPSAYDAPLLHNVDTQS 269


>SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 444

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 371 LSSDVDGNTSFRLSTSTLQSSRFEAVSTSAKHG 273
           LS D   ++S RLS+ +   SR     TS+ HG
Sbjct: 48  LSDDSSSSSSHRLSSVSYAKSRTRLELTSSSHG 80


>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 451

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 395 TGESSLDKLSSDVDGNTSFRLSTSTLQSSRFEAVSTSAKHGWSVE 261
           +  S  D  SS  DGN++   +TS   S++    STS++   SV+
Sbjct: 303 SSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVK 347


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
 Frame = +1

Query: 388 SPVRRKKNAKNKTVQNVQPDDAAKSTYVPT---NSKSSTGSRPKETP------ERQASVY 540
           +P +  + AK+ T  +  P D++ ++  PT   N++ +   + +E P      + Q + Y
Sbjct: 462 TPAKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEY 521

Query: 541 SDY-DLPKNTLHVIG 582
            D  D P+N + + G
Sbjct: 522 RDTPDTPRNIMPLPG 536


>SPBC23E6.09 |ssn6||transcriptional corepressor
           Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1102

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 464 LTYQQTANPRQDPDQKKHQN-DKPRSTQ 544
           L  QQ + P+Q P Q++HQ   +P+  Q
Sbjct: 166 LQQQQQSQPQQQPQQQQHQQPQQPQPPQ 193


>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 814

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +1

Query: 337 LNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAK 459
           L+E     S+     DD P+R+++ +  K + N      AK
Sbjct: 42  LSESLNKKSKSESDEDDIPIRKRRASSKKNMSNSSSKKRAK 82


>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1576

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +1

Query: 394 VRRKKNA---KNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQ---ASVYSDYDL 555
           ++R+K+A   + +T+QN   D+  + +Y    S S   +  KET   +    S+Y D  +
Sbjct: 161 LKREKDALFEEEQTLQNKIQDELQRRSYETPQSSSKKKTNSKETTSLETLPTSIYFDCSI 220

Query: 556 PKNTLH 573
                H
Sbjct: 221 SVRDCH 226


>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 395

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
 Frame = +1

Query: 352 PSTSEESLSND-DSPVRRKKNAKNKTV-----QNVQPDDAAKSTYVPTNSKSSTGSRPKE 513
           P TSE  + N  D  V  K   ++  V     +  +PD   K       +  ST S+ K+
Sbjct: 88  PETSENVVKNSVDESVAEKPEKEDLAVIESEDKAAKPDGEIKKNVETEVTSRSTSSQEKD 147

Query: 514 TPERQASVYSDYDLPKN 564
             E+Q     D +  K+
Sbjct: 148 ELEKQVKTLHDLNEQKD 164


>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 843

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 424 TVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASV 537
           T Q    +DA   + + T+S    GS    TP R+ S+
Sbjct: 516 TTQTTHEEDALIGSSINTSSHQHYGSTLNSTPHRRNSI 553


>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
           Atf1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 566

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 370 SLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGS-RPKETPERQASVY 540
           S  ND +      N   +T Q   PD    S    TN ++ TG+  P+ +  +Q  +Y
Sbjct: 296 SSENDQAASTTANNLLKQTQQQTFPDSIRPSFTQNTNPQAVTGTMNPQASRTQQQPMY 353


>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 613

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 181 VTVSKKPSTTN-DGAGFCSGQRSFISIHSTDQPCLADVD 294
           V  ++    TN  G  +   Q+SF+S+H  D+P     D
Sbjct: 453 VVAAQAAGNTNVKGFPYVPSQQSFVSLHFNDRPVFFGCD 491


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
 Frame = +1

Query: 274 PCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDA 453
           P    V +  N     +  +S+N    STS+  L    S V     A NK      P  +
Sbjct: 259 PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPS 318

Query: 454 AKST-YVPTNSKSSTGSRPKETPERQASVYSDYDLP 558
            ++    P  + SS  S P   P  +++      LP
Sbjct: 319 RRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP 354


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.317    0.131    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,603,712
Number of Sequences: 5004
Number of extensions: 55061
Number of successful extensions: 240
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 239
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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