Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11n16
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 34 0.090
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 34 0.090
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 33 0.21
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z99281-50|CAD56259.3| 837|Caenorhabditis elegans Hypothetical p... 31 0.48
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 31 0.63
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 1.1
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 30 1.5
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 1.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 1.9
U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11 ... 29 2.6
AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility... 29 2.6
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 29 3.4
U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.4
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 28 4.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 4.5
AY753200-1|AAV31408.1| 402|Caenorhabditis elegans UNC-89 protein. 28 4.5
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 28 4.5
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 28 4.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 4.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 4.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 4.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 4.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 4.5
AF000261-11|AAB52931.1| 268|Caenorhabditis elegans Hypothetical... 28 4.5
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 28 5.9
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical p... 28 5.9
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 28 5.9
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 7.8
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 33.9 bits (74), Expect = 0.090
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 286 DVDTASNLDDC-NVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKS 462
DV+TA NL DC NV+ +SL E PS S + S+ S + + + P++A S
Sbjct: 381 DVETAHNLSDCQNVDTMSL-ETIPSASNSTASSPSSASEAECKQIAIRIPDPIPEEAPSS 439
Query: 463 T 465
+
Sbjct: 440 S 440
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 33.9 bits (74), Expect = 0.090
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 286 DVDTASNLDDC-NVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKS 462
DV+TA NL DC NV+ +SL E PS S + S+ S + + + P++A S
Sbjct: 381 DVETAHNLSDCQNVDTMSL-ETIPSASNSTASSPSSASEAECKQIAIRIPDPIPEEAPSS 439
Query: 463 T 465
+
Sbjct: 440 S 440
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 394 VRRKKNAKNKTVQNVQPD--DAAKSTYVPTNSKSSTGSRPKETPERQAS 534
++RK AKN + VQ D + K P SKS SR K TP A+
Sbjct: 580 LKRKSRAKNSAKRPVQTDAVETVKLEKKPAQSKSKKNSRSKSTPSSFAN 628
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 31.9 bits (69), Expect = 0.36
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +1
Query: 337 LNEVFPSTSEESLSNDDSPVR----RKKNAKNKTVQN---VQPDDAAKSTYVPTNSKSST 495
L +V P T E+ + PV K+N K K V + V DD+ T+ P K T
Sbjct: 143 LPKVAPKTVEKPKTPAKKPVEISPSTKENTKTKKVSDDEFVDSDDSF-DTFTPITVKKKT 201
Query: 496 GSRPKETPERQASVYSDYDLPK 561
+ KETP+++ + PK
Sbjct: 202 PEKRKETPKKKELPSVKKEFPK 223
>Z99281-50|CAD56259.3| 837|Caenorhabditis elegans Hypothetical
protein Y57G11C.37 protein.
Length = 837
Score = 31.5 bits (68), Expect = 0.48
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 322 VEVLSLNEVFPSTSEESLSNDDSPVRRK-KNAKNKTVQNVQPDDAAKSTYVPTNSKSSTG 498
+E L L+ + T + + S D +RR +N +NK +V+ ++ KS PT S + G
Sbjct: 490 IEKLKLSSL---TYKMTRSMSDGTLRRHVENVRNKRQNSVEQEEEEKSPRTPTTSFFTLG 546
Query: 499 S-RPKETPERQASVYSD 546
S ET RQ SD
Sbjct: 547 SPTTPETEVRQRKPNSD 563
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
protein F11E6.7 protein.
Length = 1011
Score = 31.1 bits (67), Expect = 0.63
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 358 TSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPE 522
TSE S+SN+ V K + K ++VQN+ +AA+ V T S +E E
Sbjct: 506 TSESSMSNETGDV-EKTDDKKESVQNIPEQEAAEKKEVDTTISDKRLSDTEEAIE 559
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 334 SLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKE 513
S V S+SE+ S R KK+ K + D + V NSKS PK+
Sbjct: 301 SKKAVIDSSSEDEEEEKSSKKRSKKSKKESDEEQQASDSEEEVVEVKKNSKS-----PKK 355
Query: 514 TPERQA 531
TP++ A
Sbjct: 356 TPKKTA 361
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETP 519
S +E S S D P + KKN +NK + + + K Y K + P+ +P
Sbjct: 342 SENENSSSTDSRPSKPKKNVENKKSEEKINNSSEKKEYSSNVPKINYSHLPEPSP 396
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGS------RPKET 516
S S S S +D R+ N++++ P D KS PT S S + S + KET
Sbjct: 939 SRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYCKKSKET 998
Query: 517 P 519
P
Sbjct: 999 P 999
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +1
Query: 310 DDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKS 489
DD + V+ +E E+ + RK+ + +++ ++ P D +S PT S+S
Sbjct: 882 DDADSFVVGDDEPIEYEEEDEDDMIERRSSRKRRSDSRSKKSATPTDRRRSRDTPTGSRS 941
Query: 490 STGSRPKE 513
+ P +
Sbjct: 942 MRSTSPND 949
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGS------RPKET 516
S S S S +D R+ N++++ P D KS PT S S + S + KET
Sbjct: 939 SRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYCKKSKET 998
Query: 517 P 519
P
Sbjct: 999 P 999
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +1
Query: 310 DDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKS 489
DD + V+ +E E+ + RK+ + +++ ++ P D +S PT S+S
Sbjct: 882 DDADSFVVGDDEPIEYEEEDEDDMIERRSSRKRRSDSRSKKSATPTDRRRSRDTPTGSRS 941
Query: 490 STGSRPKE 513
+ P +
Sbjct: 942 MRSTSPND 949
>U40028-5|AAA81116.1| 137|Caenorhabditis elegans Hmg protein 11
protein.
Length = 137
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 DDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKN--AKNKTVQNVQP 444
++C V + E P+ +E S +N SPVRR + K V V+P
Sbjct: 8 NECLVSTNEVQEDSPAVTESSSANGSSPVRRGRGRPPKGTKVPKVKP 54
>AF056578-1|AAC78600.1| 137|Caenorhabditis elegans high mobility
group protein I alpha protein.
Length = 137
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 310 DDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKN--AKNKTVQNVQP 444
++C V + E P+ +E S +N SPVRR + K V V+P
Sbjct: 8 NECLVSTNEVQEDSPAVTESSSANGSSPVRRGRGRPPKGTKVPKVKP 54
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = +1
Query: 325 EVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPD--DAAKSTYVPTNS--KSS 492
EVLS +E + ++ ++S DD NK Q PD DA K+ V + + KS
Sbjct: 501 EVLSCDECWSIPTQRTISCDDDGYSESTRNNNKAPQVFSPDKQDAKKNCQVISENFGKSE 560
Query: 493 TGSRPKETPER 525
S ET +
Sbjct: 561 EQSEGDETSNK 571
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +1
Query: 355 STSEES----LSNDDSPVRRKKNAKNKTVQNVQPDDAAKST 465
STS ES L +P RR+KN+K Q+++ DD K +
Sbjct: 12 STSSESPEVVLKAPKAPTRRRKNSKKDRRQDMEVDDGEKES 52
>U00033-9|AAC48293.1| 323|Caenorhabditis elegans Hypothetical
protein F37C12.1 protein.
Length = 323
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Frame = +1
Query: 286 DVDTASNLDDCNVEVLSLN-EVFPSTSE------ESLSNDDSPVRRKKNAKNKTVQNVQP 444
D D + D+ + ++ + V PSTS L DDS RK+N + ++
Sbjct: 217 DEDNSDGADEDDKDIPGPSASVVPSTSSMLKPAIPKLGMDDSGNSRKRNEQRDRFAGIKL 276
Query: 445 DDAAKSTYVPTNS-KSSTGSRPKETPERQAS 534
AK + T+S SST S P P AS
Sbjct: 277 IKKAKPSEPSTSSTASSTSSAPPPLPSSAAS 307
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDA----AKSTYV-PTNSKSSTGSRPKETP 519
+T+ E +PV K+ ++ +T + V+ D ++YV PT K + G + +
Sbjct: 6743 ATTVEPTKEKLAPVESKETSEIQTAEIVEQKDVPVPETSTSYVEPTKEKLAPGESKETSE 6802
Query: 520 ERQASVYSDYDLP 558
+QA++ D+P
Sbjct: 6803 VQQAAIVEQKDVP 6815
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDA----AKSTYV-PTNSKSSTGSRPKETP 519
+T+ E +PV K+ ++ +T + V+ D ++YV PT K + G + +
Sbjct: 6763 ATTVEPTKEKLAPVESKETSEIQTAEIVEQKDVPVPETSTSYVEPTKEKLAPGESKETSE 6822
Query: 520 ERQASVYSDYDLP 558
+QA++ D+P
Sbjct: 6823 VQQAAIVEQKDVP 6835
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDA----AKSTYV-PTNSKSSTGSRPKETP 519
+T+ E +PV K+ ++ +T + V+ D ++YV PT K + G + +
Sbjct: 6763 ATTVEPTKEKLAPVESKETSEIQTAEIVEQKDVPVPETSTSYVEPTKEKLAPGESKETSE 6822
Query: 520 ERQASVYSDYDLP 558
+QA++ D+P
Sbjct: 6823 VQQAAIVEQKDVP 6835
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +1
Query: 331 LSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPK 510
LS E+ P+ E+ + V+ ++ + T +NV+ DD++ + T +SS ++PK
Sbjct: 334 LSNEELKPTEPVETKKKKERSVKPVQSKEKVTAENVEDDDSSSTI---TQFESSF-NKPK 389
Query: 511 ETPERQASV 537
T R A V
Sbjct: 390 TTAPRLAPV 398
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 1082 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 1140
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 1141 EFDLRPVSLTV 1151
>AY753200-1|AAV31408.1| 402|Caenorhabditis elegans UNC-89 protein.
Length = 402
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 48 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 106
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 107 EFDLRPVSLTV 117
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/89 (19%), Positives = 35/89 (39%)
Frame = +1
Query: 292 DTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYV 471
D DD V + S NE ++ E S+ R + +++++ A
Sbjct: 1137 DPGERSDDLQVHLDSFNESSDESNGEGSSSPSEASRSPRQQDPESMESFNEASEAPPDQR 1196
Query: 472 PTNSKSSTGSRPKETPERQASVYSDYDLP 558
+ ++ P+E + + V +YD+P
Sbjct: 1197 SEDQEAIPAEEPEEEQDPEEPVEINYDIP 1225
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +1
Query: 319 NVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTG 498
N + + EV P++ + S + R + +T+ QP +K+ + T K S
Sbjct: 795 NHNMKTAREVDPNSQKPVASQSEPETERFVKRRAQTLVKTQPKPVSKAEKIATKPKESVK 854
Query: 499 SRPKE 513
PK+
Sbjct: 855 VSPKD 859
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 1082 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 1140
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 1141 EFDLRPVSLTV 1151
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 1082 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 1140
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 1141 EFDLRPVSLTV 1151
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 1082 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 1140
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 1141 EFDLRPVSLTV 1151
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 1082 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 1140
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 1141 EFDLRPVSLTV 1151
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 364 EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 543
EE +D +R + +++N++ +DA + V TNS+ S ++ K T +++
Sbjct: 1082 EELKQSDRVEIREFDGSIKISIKNIKIEDAGEIRAVATNSEGSDETKAKLTVQKKPFA-P 1140
Query: 544 DYDLPKNTLHV 576
++DL +L V
Sbjct: 1141 EFDLRPVSLTV 1151
>AF000261-11|AAB52931.1| 268|Caenorhabditis elegans Hypothetical
protein F19B10.1 protein.
Length = 268
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 361 SEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVY 540
+E++++NDD V KKN K V+ V P A + + S S+ + + Q
Sbjct: 175 TEDNVNNDDQDVTPKKNRK-PPVEVVTPSPAKRLRGLNLRSAHSSSDSESDFQDTQCEDS 233
Query: 541 SDYD 552
D D
Sbjct: 234 QDSD 237
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 247 TIFDQNKNQ---LHHSLWMVSLKPSRRKYRILDLPFRL 143
TI D+N Q LH S+W + K R++ I++ P +L
Sbjct: 160 TIVDENAMQHLLLHESIWSHAFKKKRKRGSIVNRPSKL 197
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 355 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPK 510
S S +SL N +KKN KNK N++ A K VP++ S S PK
Sbjct: 738 SKSGDSLKNAQLMANQKKNKKNK--NNMEIPSANK---VPSSQSSIVPSAPK 784
>U41109-16|AAO12424.1| 440|Caenorhabditis elegans Hypothetical
protein F52E1.13b protein.
Length = 440
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/91 (20%), Positives = 47/91 (51%)
Frame = +1
Query: 268 DQPCLADVDTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPD 447
+ P +++ S+ ++ V + E+ S +E++ ++++ ++K+N K ++ V
Sbjct: 141 NSPIASNLHMPSSSNNDEVIEFKVPEITVSLAEDTSNSEEQ--KKKRNIKRAIMKKVFKK 198
Query: 448 DAAKSTYVPTNSKSSTGSRPKETPERQASVY 540
+AK+ + T SK S GS + E+ ++
Sbjct: 199 KSAKAIEMRTRSK-SLGSNAIYSSEKSTPLF 228
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 247 TIFDQNKNQ---LHHSLWMVSLKPSRRKYRILDLPFRL 143
TI D+N Q LH S+W + K R++ I++ P +L
Sbjct: 160 TIVDENAMQHLLLHESIWSHAFKKKRKRGSIVNRPSKL 197
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 352 PSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYV--PTNSKSSTGSRPKETPER 525
P+T+E+ S +S +TV +P A KST PT ++ S + T ++
Sbjct: 574 PTTTEQPTSTAESTTTALPFTTEQTVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKK 633
Query: 526 QAS 534
++
Sbjct: 634 AST 636
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,362
Number of Sequences: 27780
Number of extensions: 307188
Number of successful extensions: 1262
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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