Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11n14
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC089426-1|AAH89426.1| 840|Homo sapiens establishment of cohesi... 34 0.42
AK090579-1|BAC03483.1| 386|Homo sapiens protein ( Homo sapiens ... 34 0.42
AB067498-1|BAB67804.1| 864|Homo sapiens KIAA1911 protein protein. 34 0.42
L40374-1|AAC41740.1| 185|Homo sapiens thyroid receptor interact... 33 0.73
BC028985-1|AAH28985.1| 476|Homo sapiens thyroid hormone recepto... 33 0.73
BC021540-1|AAH21540.1| 476|Homo sapiens thyroid hormone recepto... 33 0.73
BC004999-1|AAH04999.1| 476|Homo sapiens thyroid hormone recepto... 33 0.73
BC004249-1|AAH04249.1| 476|Homo sapiens thyroid hormone recepto... 33 0.73
BC002680-1|AAH02680.1| 474|Homo sapiens thyroid hormone recepto... 33 0.73
AJ001902-1|CAA05080.1| 476|Homo sapiens TRIP6 protein. 33 0.73
AF312032-5|AAK21007.1| 476|Homo sapiens thyroid receptor intera... 33 0.73
AF093836-1|AAD03037.1| 476|Homo sapiens zyxin-related protein 1... 33 0.73
AF025437-1|AAC39557.1| 257|Homo sapiens Opa-interacting protein... 33 0.73
AF000974-1|AAB62222.1| 476|Homo sapiens ZRP-1 protein. 33 0.73
BC067215-1|AAH67215.1| 1160|Homo sapiens EHBP1 protein protein. 31 5.1
AY531390-1|AAS48537.1| 1196|Homo sapiens EH domain binding prote... 31 5.1
AY331186-1|AAQ97141.1| 1231|Homo sapiens NPF/calponin-like prote... 31 5.1
AC007098-1|AAY14789.1| 893|Homo sapiens unknown protein. 31 5.1
AB020710-1|BAA74926.1| 962|Homo sapiens KIAA0903 protein protein. 31 5.1
X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine recept... 30 6.8
U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B... 30 6.8
U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2 ... 30 6.8
CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein. 30 6.8
BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha... 30 6.8
AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2... 30 6.8
AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2... 30 6.8
AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha ... 30 6.8
>BC089426-1|AAH89426.1| 840|Homo sapiens establishment of cohesion
1 homolog 1 (S. cerevisiae) protein.
Length = 840
Score = 34.3 bits (75), Expect = 0.42
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -1
Query: 525 HGVFLSARKHFG--VQRCYPT*ADGKIMLVLPDKSRYKIESMNELQALI 385
H F+SA K+ G +R DG+I++VLP+ +Y ++ ++E++ ++
Sbjct: 641 HNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMV 689
>AK090579-1|BAC03483.1| 386|Homo sapiens protein ( Homo sapiens
cDNA FLJ33260 fis, clone ASTRO2005896, weakly similar to
DNA damage inducible protein. ).
Length = 386
Score = 34.3 bits (75), Expect = 0.42
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -1
Query: 525 HGVFLSARKHFG--VQRCYPT*ADGKIMLVLPDKSRYKIESMNELQALI 385
H F+SA K+ G +R DG+I++VLP+ +Y ++ ++E++ ++
Sbjct: 187 HNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMV 235
>AB067498-1|BAB67804.1| 864|Homo sapiens KIAA1911 protein protein.
Length = 864
Score = 34.3 bits (75), Expect = 0.42
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -1
Query: 525 HGVFLSARKHFG--VQRCYPT*ADGKIMLVLPDKSRYKIESMNELQALI 385
H F+SA K+ G +R DG+I++VLP+ +Y ++ ++E++ ++
Sbjct: 665 HNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMV 713
>L40374-1|AAC41740.1| 185|Homo sapiens thyroid receptor interactor
protein.
Length = 185
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 54 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 82
>BC028985-1|AAH28985.1| 476|Homo sapiens thyroid hormone receptor
interactor 6 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>BC021540-1|AAH21540.1| 476|Homo sapiens thyroid hormone receptor
interactor 6 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>BC004999-1|AAH04999.1| 476|Homo sapiens thyroid hormone receptor
interactor 6 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>BC004249-1|AAH04249.1| 476|Homo sapiens thyroid hormone receptor
interactor 6 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>BC002680-1|AAH02680.1| 474|Homo sapiens thyroid hormone receptor
interactor 6 protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 361 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 389
>AJ001902-1|CAA05080.1| 476|Homo sapiens TRIP6 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>AF312032-5|AAK21007.1| 476|Homo sapiens thyroid receptor
interacting protein 6 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>AF093836-1|AAD03037.1| 476|Homo sapiens zyxin-related protein 1
protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>AF025437-1|AAC39557.1| 257|Homo sapiens Opa-interacting protein
OIP1 protein.
Length = 257
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 144 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 172
>AF000974-1|AAB62222.1| 476|Homo sapiens ZRP-1 protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.73
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 296 FTCASASFGVDGLPCTADSTASVHIIGYF 382
FTC G+DG+P T D+T+ +H I F
Sbjct: 363 FTCVVCHRGLDGIPFTVDATSQIHCIEDF 391
>BC067215-1|AAH67215.1| 1160|Homo sapiens EHBP1 protein protein.
Length = 1160
Score = 30.7 bits (66), Expect = 5.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 642 PRPVLVRFMNIESRQAVWDSKTSLKGTGVTISEFLTKIRHGV-FLSARKHF 493
P PVL R N VW + + GV I+ F T R+G+ F + HF
Sbjct: 400 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 450
>AY531390-1|AAS48537.1| 1196|Homo sapiens EH domain binding protein
1 protein.
Length = 1196
Score = 30.7 bits (66), Expect = 5.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 642 PRPVLVRFMNIESRQAVWDSKTSLKGTGVTISEFLTKIRHGV-FLSARKHF 493
P PVL R N VW + + GV I+ F T R+G+ F + HF
Sbjct: 400 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 450
>AY331186-1|AAQ97141.1| 1231|Homo sapiens NPF/calponin-like protein
protein.
Length = 1231
Score = 30.7 bits (66), Expect = 5.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 642 PRPVLVRFMNIESRQAVWDSKTSLKGTGVTISEFLTKIRHGV-FLSARKHF 493
P PVL R N VW + + GV I+ F T R+G+ F + HF
Sbjct: 435 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 485
>AC007098-1|AAY14789.1| 893|Homo sapiens unknown protein.
Length = 893
Score = 30.7 bits (66), Expect = 5.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 642 PRPVLVRFMNIESRQAVWDSKTSLKGTGVTISEFLTKIRHGV-FLSARKHF 493
P PVL R N VW + + GV I+ F T R+G+ F + HF
Sbjct: 223 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 273
>AB020710-1|BAA74926.1| 962|Homo sapiens KIAA0903 protein protein.
Length = 962
Score = 30.7 bits (66), Expect = 5.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 642 PRPVLVRFMNIESRQAVWDSKTSLKGTGVTISEFLTKIRHGV-FLSARKHF 493
P PVL R N VW + + GV I+ F T R+G+ F + HF
Sbjct: 166 PSPVLGRKPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHF 216
>X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine receptor
protein.
Length = 452
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B
subunit protein.
Length = 360
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 360
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein.
Length = 452
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha 2
protein.
Length = 452
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2
subunit B protein.
Length = 452
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2
subunit A protein.
Length = 452
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
>AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 452
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 158 LNILFVMFLFYFDTNSLRNLFCK 90
+NIL +F F+ +TN R FCK
Sbjct: 6 VNILTALFAFFLETNHFRTAFCK 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,208,082
Number of Sequences: 237096
Number of extensions: 1920191
Number of successful extensions: 6969
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6963
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -