Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11n09
         (115 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil do...    28   4.8  
BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil do...    28   4.8  
AL833308-1|CAD89924.1|  878|Homo sapiens hypothetical protein pr...    28   4.8  
AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil do...    28   4.8  

>BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil domain
            containing 1 protein.
          Length = 1478

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 28   HCNSAPDLSCFYCCNN 75
            HC     + C+YCCNN
Sbjct: 1194 HCRICGRIFCYYCCNN 1209


>BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil domain
            containing 1 protein.
          Length = 1478

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 28   HCNSAPDLSCFYCCNN 75
            HC     + C+YCCNN
Sbjct: 1194 HCRICGRIFCYYCCNN 1209


>AL833308-1|CAD89924.1|  878|Homo sapiens hypothetical protein
           protein.
          Length = 878

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 28  HCNSAPDLSCFYCCNN 75
           HC     + C+YCCNN
Sbjct: 594 HCRICGRIFCYYCCNN 609


>AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil domain
            containing 1 protein.
          Length = 1478

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 28   HCNSAPDLSCFYCCNN 75
            HC     + C+YCCNN
Sbjct: 1194 HCRICGRIFCYYCCNN 1209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,983,631
Number of Sequences: 237096
Number of extensions: 80222
Number of successful extensions: 240
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 76,859,062
effective HSP length: 18
effective length of database: 72,591,334
effective search space used: 1379235346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)