Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11n09
(115 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 20 3.2
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 19 4.2
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 19 4.2
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 19 4.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 19 5.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 19 5.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 19 5.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 19 5.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 19 5.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 19 5.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 19 5.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 19 5.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 19 5.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 18 9.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 18 9.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 18 9.7
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/21 (33%), Positives = 10/21 (47%)
Frame = -1
Query: 67 NNKNRIDQGQNYNET*NQRSN 5
+N N + NYN N +N
Sbjct: 83 SNNNSLSNNYNYNNNYNNYNN 103
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 19.4 bits (38), Expect = 4.2
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = -1
Query: 109 PXKVQSFKCKISYYNNKNRIDQGQNYNET*NQRSN 5
P + S K + NN + NYN N +N
Sbjct: 79 PKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNN 113
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 19.4 bits (38), Expect = 4.2
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1
Query: 79 ISYYNNKNRID 47
++ YNNKN +D
Sbjct: 181 LALYNNKNFVD 191
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 19.4 bits (38), Expect = 4.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 67 NNKNRIDQGQNYNET*NQRSN 5
NN+N +Q N NQ++N
Sbjct: 427 NNQNDNNQKNNKKNANNQKNN 447
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
Y+N N + NYN
Sbjct: 91 YSNYNNYNNNNNYN 104
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 70 YNNKNRIDQGQNYN 29
YNN N + NYN
Sbjct: 329 YNNNNYNNNYNNYN 342
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 18.2 bits (35), Expect = 9.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 55 CFYCCNNLFYI 87
CF C N +++I
Sbjct: 415 CFVCFNLMYWI 425
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 18.2 bits (35), Expect = 9.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 55 CFYCCNNLFYI 87
CF C N +++I
Sbjct: 415 CFVCFNLMYWI 425
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 18.2 bits (35), Expect = 9.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +1
Query: 55 CFYCCNNLFYI 87
CF C N +++I
Sbjct: 353 CFVCFNLMYWI 363
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,203
Number of Sequences: 438
Number of extensions: 233
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used: 2630721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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