Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11n08
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74036-4|CAE17849.1|  112|Caenorhabditis elegans Hypothetical pr...    56   3e-08
AF022975-9|AAB70669.1|  344|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    28   8.3  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL033514-12|CAA22099.1|  208|Caenorhabditis elegans Hypothetical...    28   8.3  

>Z74036-4|CAE17849.1|  112|Caenorhabditis elegans Hypothetical
           protein F55C10.5 protein.
          Length = 112

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/48 (52%), Positives = 30/48 (62%)
 Frame = +2

Query: 338 HVNFSDKGEVKERREKFLTAKYGSHQMALIRKRLAVEMWLYDELQKLY 481
           H  F D     E R + LT KYG HQMALIRKR+ VE W+  E+ KL+
Sbjct: 7   HARFGDSKSRMEDRSRVLTMKYGKHQMALIRKRMKVENWIETEVTKLF 54


>AF022975-9|AAB70669.1|  344|Caenorhabditis elegans Hypothetical
           protein K09C6.2 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
 Frame = +2

Query: 311 ERSPAKAGLHVNFSDKGEVKERREKFLTAKYGSHQ-MALIRKRLAVEMWLYDELQKLYEI 487
           ++ P+ A        + E ++ +EK    K  + +   L  KRL  E  LY +L+   + 
Sbjct: 169 KKEPSSAPTTEETGTENEEEDDKEKTDKEKLDAEEEKELAEKRLEREQKLYKDLKSSSDD 228

Query: 488 PTLLADAKKPQKDVHKFINELLDK 559
            +   D K    D  +++ E+LDK
Sbjct: 229 TSSSIDDKMNFDDEIEYLEEMLDK 252


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 269 PAPAPRAHPALSPT-ERSPAKAG 334
           PAPAP A PAL+P+ + +PA  G
Sbjct: 121 PAPAPVAEPALAPSPDAAPAADG 143


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +2

Query: 305 PTER-SPAKAGLHVNFSDKGEVKERREKFLTAKYGSH-QMALIRKRLAVEMWLYDELQKL 478
           PT+   P+ A        + E ++ +EK    K  +  + AL  KRL  E  LY +L+  
Sbjct: 175 PTDMVEPSSAPTTEETETENEEEDDKEKTDKEKLDAEKEKALAEKRLEREQKLYKDLKSS 234

Query: 479 YEIPTLLADAKKPQKDVHKFINELLD 556
            +  +   D K    D  +++ E+LD
Sbjct: 235 SDDTSSSIDDKMNFDDEIEYLEEMLD 260


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +2

Query: 305 PTER-SPAKAGLHVNFSDKGEVKERREKFLTAKYGSH-QMALIRKRLAVEMWLYDELQKL 478
           PT+   P+ A        + E ++ +EK    K  +  + AL  KRL  E  LY +L+  
Sbjct: 175 PTDMVEPSSAPTTEETETENEEEDDKEKTDKEKLDAEKEKALAEKRLEREQKLYKDLKSS 234

Query: 479 YEIPTLLADAKKPQKDVHKFINELLD 556
            +  +   D K    D  +++ E+LD
Sbjct: 235 SDDTSSSIDDKMNFDDEIEYLEEMLD 260


>AL033514-12|CAA22099.1|  208|Caenorhabditis elegans Hypothetical
           protein Y75B8A.11 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 160 TLRGCSTQHNT--TTVMSMITHLTLAEAFAVHNVRMRRRC 47
           T+  C+++ N   T+  S I H  L  A  +  +R RRRC
Sbjct: 118 TVPACTSKKNVLLTSTTSTINHQKLEPATTLSPIRQRRRC 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,043,025
Number of Sequences: 27780
Number of extensions: 250020
Number of successful extensions: 814
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)