Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11n08
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.1  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.1  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   9.4  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 86  SFRGTQRPNASAMRLKLPSRPPRQEH 9
           SFR T+RP   A+ L   S  P  EH
Sbjct: 119 SFRCTERPEDGALILHYYSDRPGLEH 144


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 86  SFRGTQRPNASAMRLKLPSRPPRQEH 9
           SFR T+RP   A+ L   S  P  EH
Sbjct: 119 SFRCTERPEDGALILHYYSDRPGLEH 144


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 403 WQPSDGTDTQATRGRDVALRRAAEALRDTDIASG 504
           WQP D   T+AT G  V L        ++ I +G
Sbjct: 199 WQPEDEECTEATAGA-VVLETCQRNSNNSTITAG 231


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 503  DAKKPQKDVHKFINELLDKAKTL*RT 580
            +A K + DV   +NE LDKA  +  T
Sbjct: 1376 NAGKKKIDVRAKLNEYLDKADVIVNT 1401


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/54 (20%), Positives = 23/54 (42%)
 Frame = -3

Query: 163 GTLRGCSTQHNTTTVMSMITHLTLAEAFAVHNVRMRRRCDSNYRPARHGKNTET 2
           GT++ C+T   T ++ S ++   +A A   +  +      +   P   G +  T
Sbjct: 25  GTIQACTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSAST 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,409
Number of Sequences: 438
Number of extensions: 3082
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)