Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11n03
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical pr... 32 0.51
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas... 30 2.0
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 29 3.6
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 29 4.7
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 29 4.7
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 28 6.2
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical
protein Y45F10C.1 protein.
Length = 645
Score = 31.9 bits (69), Expect = 0.51
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Frame = +1
Query: 286 EDTMPVEEYTQPSLSYMS-SSMFATILEDTIIQIRILDECNSELRIIKTLADIKLLRALK 462
+D+ EE+T+ LSY FAT++ D +++I D+ + K I LL+
Sbjct: 416 DDSFNFEEFTRMRLSYNDVLKSFATVI-DRAPKVKISDDTKGNVDKHKAQQIIDLLKTFT 474
Query: 463 FGIAQPKTADELENIDPKNLECE---NYKIYKLDSD-----RRNIINAITDLYVEMTLNK 618
+ ++A +LE +D ++C+ N K + D + + +++N + D M ++
Sbjct: 475 TVV---ESAPKLEIVDESEVQCDAVNNNKAQEADVEGSEYPKISMLN-VLDKLDNMLISL 530
Query: 619 NYKTLTSFLNSIFDKEHYRIALAENEAKNKL 711
+ L LN I E R+ A+ KL
Sbjct: 531 ESELLNELLNEI---EQLRVGPADKMIPLKL 558
>Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical
protein B0513.6 protein.
Length = 636
Score = 31.9 bits (69), Expect = 0.51
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Frame = +1
Query: 286 EDTMPVEEYTQPSLSYMS-SSMFATILEDTIIQIRILDECNSELRIIKTLADIKLLRALK 462
+D+ EE+T+ LSY FAT++ D +++I D+ + K I LL+
Sbjct: 407 DDSFNFEEFTRMRLSYNDVLKSFATVI-DRAPKVKISDDTKGNVDKHKAQQIIDLLKTFT 465
Query: 463 FGIAQPKTADELENIDPKNLECE---NYKIYKLDSD-----RRNIINAITDLYVEMTLNK 618
+ ++A +LE +D ++C+ N K + D + + +++N + D M ++
Sbjct: 466 TVV---ESAPKLEIVDESEVQCDAVNNNKAQEADVEGSEYPKISMLN-VLDKLDNMLISL 521
Query: 619 NYKTLTSFLNSIFDKEHYRIALAENEAKNKL 711
+ L LN I E R+ A+ KL
Sbjct: 522 ESELLNELLNEI---EQLRVGPADKMIPLKL 549
>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
protein 11 protein.
Length = 1032
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 208 QELSSLYKRSLSQLLQMIPETITVTEEDTMPVEEYTQPSLS-YMSSSMFATILEDTIIQI 384
++L KR+ S LLQ++P+++ + ++ PV+ S+S Y S + T L +
Sbjct: 783 EQLEDERKRNESLLLQLLPKSVANSLKNGQPVDAEFYDSVSIYFSDIVGFTALSSKSTPL 842
Query: 385 RILDECNSELRIIKTLAD 438
++++ N+ T+ D
Sbjct: 843 QVVNMLNNLYTNFDTIID 860
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 298 PVEEYTQPSL--SYMSSSMFATILEDTI 375
PV E+ QPS+ MS+S+F+T +E+T+
Sbjct: 933 PVNEFMQPSVIRKKMSTSVFSTAVEETV 960
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 298 PVEEYTQPSL--SYMSSSMFATILEDTI 375
PV E+ QPS+ MS+S+F+T +E+T+
Sbjct: 933 PVNEFMQPSVIRKKMSTSVFSTAVEETV 960
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 298 PVEEYTQPSL--SYMSSSMFATILEDTI 375
PV E+ QPS+ MS+S+F+T +E+T+
Sbjct: 933 PVNEFMQPSVIRKKMSTSVFSTAVEETV 960
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 298 PVEEYTQPSL--SYMSSSMFATILEDTI 375
PV E+ QPS+ MS+S+F+T +E+T+
Sbjct: 933 PVNEFMQPSVIRKKMSTSVFSTAVEETV 960
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 298 PVEEYTQPSL--SYMSSSMFATILEDTI 375
PV E+ QPS+ MS+S+F+T +E+T+
Sbjct: 957 PVNEFMQPSVIRKKMSTSVFSTAVEETV 984
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 636 CQCLVIFIKRHLHIQIGNGVNDISPVRIKLIYFVIFAFQIL 514
C C IF+ HLH + +ND+ P R L V+ AF +L
Sbjct: 128 CCCFYIFVVYHLHELLEFVMNDV-PSRATLFPMVLPAFILL 167
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 636 CQCLVIFIKRHLHIQIGNGVNDISPVRIKLIYFVIFAFQIL 514
C C IF+ HLH + +ND+ P R L V+ AF +L
Sbjct: 183 CCCFYIFVVYHLHELLEFVMNDV-PSRATLFPMVLPAFILL 222
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective
pharynx development protein2 protein.
Length = 225
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 14 FFGLPPFVIENLLQWGIKFNW 76
FF LPPF + + L WG+K ++
Sbjct: 31 FFTLPPFQLASSLVWGLKIDF 51
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 175 IYTDSSRMSQKQELSS--LYKRSLSQLLQMIPETITVTEEDTMPVEEYTQPSLSYMSSSM 348
IY DS ++K+++ + LY +++ + T T + V++YT S S ++ S+
Sbjct: 221 IYRDSYPRTEKRDMKAAGLYFLECLAVIEFVNLTFTQWVFPWLHVQDYTSLSFSTIALSL 280
Query: 349 FATILEDTI 375
F I+ I
Sbjct: 281 FTGIIPGII 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,208,466
Number of Sequences: 27780
Number of extensions: 330698
Number of successful extensions: 927
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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