Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11m22
         (664 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.       31   2.8  
AF493886-1|AAM12600.1|  125|Homo sapiens ADP-ribosylation factor...    30   8.5  

>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
          Length = 1609

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +1

Query: 112 FISTMGDEEQATLDNQFIEFSKLFENKRDGTTITLYQSDFWFRQAKVLDDRRITTIDTGV 291
           FI T GDE+QA   ++F +FS L       +T+    S + F  + VL +  +T  D  V
Sbjct: 193 FIRTGGDEQQALCTDEFSDFSPLTGGNVAFSTLEGRPSAYNFDNSPVLQE-WVTATDIRV 251

Query: 292 IFNK 303
             N+
Sbjct: 252 TLNR 255


>AF493886-1|AAM12600.1|  125|Homo sapiens ADP-ribosylation
           factor-like protein variant protein.
          Length = 125

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +1

Query: 316 EINYDEWLEFLSELCEVKGLNEEAVKTSLTN 408
           E++  ++ +F+ +LC V G N+EA   SLT+
Sbjct: 87  ELSASQFAQFIKKLCGVTGTNDEASPGSLTS 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,318,309
Number of Sequences: 237096
Number of extensions: 1376941
Number of successful extensions: 2046
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)