Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11m20
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.0
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 29 4.0
Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL132853-6|CAC42383.1| 92|Caenorhabditis elegans Hypothetical ... 28 7.0
Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z66564-3|CAA91475.1| 284|Caenorhabditis elegans Hypothetical pr... 27 9.2
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 QPFSSSNNAKRHAPASPNGKINKNKEKYLQSDAS-KYLQGWAQKMKHPQKQIPVRTPAPK 429
+PF ++ K P P N +Y Q S Q ++ Q IP P P
Sbjct: 713 RPFRPTSRPKTPPPPPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIP---PPPP 769
Query: 430 PGEVPNLEDSMVELVKNDKGEYEIKQPNP 516
P P+ E +MV + + P P
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 QPFSSSNNAKRHAPASPNGKINKNKEKYLQSDAS-KYLQGWAQKMKHPQKQIPVRTPAPK 429
+PF ++ K P P N +Y Q S Q ++ Q IP P P
Sbjct: 713 RPFRPTSRPKTPPPPPPMQHQNHQNHQYQQQHPSLPRSASTPQPIQQQQSSIP---PPPP 769
Query: 430 PGEVPNLEDSMVELVKNDKGEYEIKQPNP 516
P P+ E +MV + + P P
Sbjct: 770 PPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +1
Query: 232 NTMNLTGQPFSSSNNAKRHAPASPNGKINKNKEKYLQSDASKYLQGWAQKMKHPQKQIPV 411
N N Q F ++NN + N N N A + Q Q+++ PQ+ PV
Sbjct: 67 NNNNNQQQQFYNNNNNNYNN----NNYNNNNNYNQQPQGAQQPQQQVQQQVQQPQQ--PV 120
Query: 412 RTPAPKPGEVPNLEDSMVELVKNDKGEYEIKQP 510
+ P P P P + S + V++ + +I QP
Sbjct: 121 QQPQPTPIRPPQPQRSGQQPVQSFESHTQIVQP 153
>Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical
protein F09B12.2 protein.
Length = 295
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 53 FCFLLGHAR*SYLRNCHRYYLWLIRIYHQS 142
FC G R +L + H Y L L+ HQS
Sbjct: 228 FCIYQGQTRIEFLMDVHAYQLGLLENLHQS 257
>AL132853-6|CAC42383.1| 92|Caenorhabditis elegans Hypothetical
protein Y80D3A.10 protein.
Length = 92
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 359 TSKVGRRK*SIPKSKFP*GRRLLSPEKCPTWRTLWWNWSR 478
TS G P + LL PE P W L W W +
Sbjct: 19 TSAAGNYYSGYPSDRTMKRSALLQPENNPEWNQLGWAWGK 58
>Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 265 SSNNAKRHAPASPNGKIN-KNKEKYLQSDASKYLQGWAQKMKHPQKQIPVRTPAPKPGEV 441
+S A AP P G I K+K K + G ++ +K +PVRTP +P
Sbjct: 420 ASGTAMPRAPCGPRGPIGPKDKFKNEAKGNDDTMTG-----EYEEKVVPVRTPKARPSTA 474
Query: 442 PNLEDSMVE 468
+S +E
Sbjct: 475 RVNRESSLE 483
>Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 265 SSNNAKRHAPASPNGKIN-KNKEKYLQSDASKYLQGWAQKMKHPQKQIPVRTPAPKPGEV 441
+S A AP P G I K+K K + G ++ +K +PVRTP +P
Sbjct: 420 ASGTAMPRAPCGPRGPIGPKDKFKNEAKGNDDTMTG-----EYEEKVVPVRTPKARPSTA 474
Query: 442 PNLEDSMVE 468
+S +E
Sbjct: 475 RVNRESSLE 483
>Z66564-3|CAA91475.1| 284|Caenorhabditis elegans Hypothetical
protein F52D10.4 protein.
Length = 284
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 413 LTGICFWGCFIFCAQPWRYLLASDCRYFSL 324
LTG+ W + A W + L + YFSL
Sbjct: 52 LTGLAIWDIVLLIAALWHHSLWATMHYFSL 81
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 385 KHPQKQIPVRTPAPKPGEVPNLEDSMVELVKNDKGEYE 498
K P + PV PAP E P +E+++ E+ E E
Sbjct: 19 KVPTTEPPVDVPAPVTEEAPKVEEAVAEIAAPAAAEGE 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,052,122
Number of Sequences: 27780
Number of extensions: 331486
Number of successful extensions: 1234
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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