Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11m15
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   3.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   5.4  
Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium...    23   9.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.5  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 572 EKSCYAALEREISRDIKAEN 631
           +K C+ ALER+   +I+AE+
Sbjct: 747 QKECFRALERQAIENIEAED 766


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 2   NSSCALRSPVMPSMINLTK*RSYEKHSQKNLCQISNSKRQ 121
           N++  L SPV PS++ L    SY      N+ +I++S R+
Sbjct: 293 NAAAKLCSPVFPSVVPLVPLDSYHPALDFNI-RINSSTRR 331


>Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 507 LELFQKNYLQSMERLP 554
           ++LF KNY+ +++R P
Sbjct: 34  MQLFGKNYVDNVDRFP 49


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +3

Query: 507 LELFQKNYLQSMERLP 554
           ++LF KNY+ +++R P
Sbjct: 949 MQLFGKNYVDNVDRFP 964


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,410
Number of Sequences: 2352
Number of extensions: 12139
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)