Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11m15
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030652-1|AAH30652.1| 929|Homo sapiens testis expressed 10 pro... 33 0.77
AY598337-1|AAT06748.1| 929|Homo sapiens L18 protein. 32 2.4
AL445214-2|CAI39743.1| 929|Homo sapiens testis expressed 10 pro... 32 2.4
AL353805-2|CAI12538.1| 929|Homo sapiens testis expressed 10 pro... 32 2.4
AK000294-1|BAA91062.1| 929|Homo sapiens protein ( Homo sapiens ... 32 2.4
AB060968-1|BAB87845.1| 929|Homo sapiens nbla10363 protein. 32 2.4
X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein. 31 4.1
U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein. 31 4.1
U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein. 31 4.1
AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golg... 31 4.1
AL445214-1|CAI39742.1| 171|Homo sapiens testis expressed 10 pro... 31 5.4
AL353805-1|CAI12537.1| 171|Homo sapiens testis expressed 10 pro... 31 5.4
>BC030652-1|AAH30652.1| 929|Homo sapiens testis expressed 10
protein.
Length = 929
Score = 33.5 bits (73), Expect = 0.77
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLKLTKK 381
++W +QP RED +TLIK L +++ L+ T LKL K
Sbjct: 485 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLKLFSK 529
>AY598337-1|AAT06748.1| 929|Homo sapiens L18 protein.
Length = 929
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLKLTKK 381
++W +QP RED +TLIK L +++ L+ T LK K
Sbjct: 485 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLKFFSK 529
>AL445214-2|CAI39743.1| 929|Homo sapiens testis expressed 10
protein.
Length = 929
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLKLTKK 381
++W +QP RED +TLIK L +++ L+ T LK K
Sbjct: 485 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLKFFSK 529
>AL353805-2|CAI12538.1| 929|Homo sapiens testis expressed 10
protein.
Length = 929
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLKLTKK 381
++W +QP RED +TLIK L +++ L+ T LK K
Sbjct: 485 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLKFFSK 529
>AK000294-1|BAA91062.1| 929|Homo sapiens protein ( Homo sapiens
cDNA FLJ20287 fis, clone HEP04390. ).
Length = 929
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLKLTKK 381
++W +QP RED +TLIK L +++ L+ T LK K
Sbjct: 485 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLKFFSK 529
>AB060968-1|BAB87845.1| 929|Homo sapiens nbla10363 protein.
Length = 929
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLKLTKK 381
++W +QP RED +TLIK L +++ L+ T LK K
Sbjct: 485 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLKFFSK 529
>X82834-1|CAA58041.1| 2185|Homo sapiens 256 kD golgin protein.
Length = 2185
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 190 EETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLK 369
+ET++ H E L+ + + + NT +LQ + + K L ++ +RKV ELT+KLK
Sbjct: 1128 DETKLKAHLEKLEVDLNKSLKENT-FLQEQLVELKMLAEE----DKRKVS---ELTSKLK 1179
Query: 370 LTKKDSQRIL*VHE 411
T ++ Q + HE
Sbjct: 1180 TTDEEFQSLKSSHE 1193
>U41740-1|AAC50434.1| 2230|Homo sapiens trans-Golgi p230 protein.
Length = 2230
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 190 EETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLK 369
+ET++ H E L+ + + + NT +LQ + + K L ++ +RKV ELT+KLK
Sbjct: 1128 DETKLKAHLEKLEVDLNKSLKENT-FLQEQLVELKMLAEE----DKRKVS---ELTSKLK 1179
Query: 370 LTKKDSQRIL*VHE 411
T ++ Q + HE
Sbjct: 1180 TTDEEFQSLKSSHE 1193
>U31906-1|AAC51791.1| 2083|Homo sapiens golgin-245 protein.
Length = 2083
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 190 EETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLK 369
+ET++ H E L+ + + + NT +LQ + + K L ++ +RKV ELT+KLK
Sbjct: 983 DETKLKAHLEKLEVDLNKSLKENT-FLQEQLVELKMLAEE----DKRKVS---ELTSKLK 1034
Query: 370 LTKKDSQRIL*VHE 411
T ++ Q + HE
Sbjct: 1035 TTDEEFQSLKSSHE 1048
>AB209693-1|BAD92930.1| 1310|Homo sapiens golgi autoantigen, golgin
subfamily a, 4 variant protein.
Length = 1310
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 190 EETEINIHQELLKKPIREQITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLK 369
+ET++ H E L+ + + + NT +LQ + + K L ++ +RKV ELT+KLK
Sbjct: 1159 DETKLKAHLEKLEVDLNKSLKENT-FLQEQLVELKMLAEE----DKRKVS---ELTSKLK 1210
Query: 370 LTKKDSQRIL*VHE 411
T ++ Q + HE
Sbjct: 1211 TTDEEFQSLKSSHE 1224
>AL445214-1|CAI39742.1| 171|Homo sapiens testis expressed 10
protein.
Length = 171
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLK 369
++W +QP RED +TLIK L +++ L+ T LK
Sbjct: 130 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLK 170
>AL353805-1|CAI12537.1| 171|Homo sapiens testis expressed 10
protein.
Length = 171
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 247 ITWNTHYLQPEREDEKTLIKKADDLTERKVLLTVELTNKLK 369
++W +QP RED +TLIK L +++ L+ T LK
Sbjct: 130 VSWRLMQIQPNREDTETLIKAVYTLYQQRGLILPVRTLLLK 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,331,526
Number of Sequences: 237096
Number of extensions: 1523395
Number of successful extensions: 3592
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3592
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -