Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11m15
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089407-1|AAL90145.1|  440|Drosophila melanogaster AT23003p pro...    41   0.001
AE014297-812|AAF54285.2|  440|Drosophila melanogaster CG8236-PA ...    41   0.001
AY058452-1|AAL13681.1|  558|Drosophila melanogaster GH24360p pro...    29   4.8  
AE013599-1828|AAF58291.1|  558|Drosophila melanogaster CG8257-PA...    29   4.8  

>AY089407-1|AAL90145.1|  440|Drosophila melanogaster AT23003p
           protein.
          Length = 440

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 28/99 (28%), Positives = 47/99 (47%)
 Frame = +2

Query: 386 ANEFCEYMKQLGGEQQSNLFSPKAIKELFQIEFDTHVARSLRVISKELPTIDGKIAVAVG 565
           A  F E++   G   +SNL +P+ +K LF I+ D  +  S++   KE+  I   +A    
Sbjct: 262 AERFVEWLNSFG-TLESNL-TPEKVKNLFSIKGDRTLLASVKTDPKEVNAIAQTVADKWN 319

Query: 566 KPEKSCYAALEREISRDIKAENCSNKTIAFGQSLPRHDQ 682
           KP  +     E+ I+      N      AFG+++P  D+
Sbjct: 320 KPHMAIELKYEKHINDHATRVNQKPLLSAFGRTVPLKDR 358


>AE014297-812|AAF54285.2|  440|Drosophila melanogaster CG8236-PA
           protein.
          Length = 440

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 28/99 (28%), Positives = 47/99 (47%)
 Frame = +2

Query: 386 ANEFCEYMKQLGGEQQSNLFSPKAIKELFQIEFDTHVARSLRVISKELPTIDGKIAVAVG 565
           A  F E++   G   +SNL +P+ +K LF I+ D  +  S++   KE+  I   +A    
Sbjct: 262 AERFVEWLNSFG-TLESNL-TPEKVKNLFSIKGDRTLLASVKTDPKEVNAIAQTVADKWN 319

Query: 566 KPEKSCYAALEREISRDIKAENCSNKTIAFGQSLPRHDQ 682
           KP  +     E+ I+      N      AFG+++P  D+
Sbjct: 320 KPHMAIELKYEKHINDHATRVNQKPLLSAFGRTVPLKDR 358


>AY058452-1|AAL13681.1|  558|Drosophila melanogaster GH24360p
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = +3

Query: 429 NNPIYFLLKRSKNYFRLSSIHMSLEALELFQKN 527
           +N +YF + +SKNY +L ++ +S + L+  ++N
Sbjct: 186 DNSVYFDVSKSKNYGKLQNLGLSEDKLDPIKRN 218


>AE013599-1828|AAF58291.1|  558|Drosophila melanogaster CG8257-PA
           protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = +3

Query: 429 NNPIYFLLKRSKNYFRLSSIHMSLEALELFQKN 527
           +N +YF + +SKNY +L ++ +S + L+  ++N
Sbjct: 186 DNSVYFDVSKSKNYGKLQNLGLSEDKLDPIKRN 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,258,181
Number of Sequences: 53049
Number of extensions: 496887
Number of successful extensions: 1556
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)