Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11m09
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46935-9|CAA87053.1|  523|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z36949-3|CAA85417.1|  523|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U36187-1|AAC06337.1|  523|Caenorhabditis elegans cyclophilin iso...    31   1.1  
AF421146-1|AAL27008.1|  523|Caenorhabditis elegans cyclophilin M...    31   1.1  
Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical ...    28   6.1  

>Z46935-9|CAA87053.1|  523|Caenorhabditis elegans Hypothetical
           protein F59E10.2 protein.
          Length = 523

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 344 YQITKDSVKLRAVTNFGPTLIKISSFDLSIMSTCRNLYRY-SLYYFSSTRVHPML 505
           Y   K +  +R VTNFGP  + +  F   +   C N   + S  Y+++T+ H ++
Sbjct: 273 YSRVKKNAFVRLVTNFGP--LNLELFAPKVPKACENFITHCSNGYYNNTKFHRLI 325


>Z36949-3|CAA85417.1|  523|Caenorhabditis elegans Hypothetical
           protein F59E10.2 protein.
          Length = 523

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 344 YQITKDSVKLRAVTNFGPTLIKISSFDLSIMSTCRNLYRY-SLYYFSSTRVHPML 505
           Y   K +  +R VTNFGP  + +  F   +   C N   + S  Y+++T+ H ++
Sbjct: 273 YSRVKKNAFVRLVTNFGP--LNLELFAPKVPKACENFITHCSNGYYNNTKFHRLI 325


>U36187-1|AAC06337.1|  523|Caenorhabditis elegans cyclophilin
           isoform 4 protein.
          Length = 523

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 344 YQITKDSVKLRAVTNFGPTLIKISSFDLSIMSTCRNLYRY-SLYYFSSTRVHPML 505
           Y   K +  +R VTNFGP  + +  F   +   C N   + S  Y+++T+ H ++
Sbjct: 273 YSRVKKNAFVRLVTNFGP--LNLELFAPKVPKACENFITHCSNGYYNNTKFHRLI 325


>AF421146-1|AAL27008.1|  523|Caenorhabditis elegans cyclophilin
           MOG-6 protein.
          Length = 523

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 344 YQITKDSVKLRAVTNFGPTLIKISSFDLSIMSTCRNLYRY-SLYYFSSTRVHPML 505
           Y   K +  +R VTNFGP  + +  F   +   C N   + S  Y+++T+ H ++
Sbjct: 273 YSRVKKNAFVRLVTNFGP--LNLELFAPKVPKACENFITHCSNGYYNNTKFHRLI 325


>Z92807-5|CAB07265.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 469 LLFFFDTCPPNAECRSLHMNSI*VYCLCCFVIKINVIN 582
           +L  FDT  P+   R+LH  +  V C+C  ++     N
Sbjct: 320 ILVVFDTHVPSFRRRTLHQGAQLVVCICFLILTFMTFN 357


>AL021482-5|CAA16342.1|  480|Caenorhabditis elegans Hypothetical
           protein K11D9.3 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 469 LLFFFDTCPPNAECRSLHMNSI*VYCLCCFVIKINVIN 582
           +L  FDT  P+   R+LH  +  V C+C  ++     N
Sbjct: 320 ILVVFDTHVPSFRRRTLHQGAQLVVCICFLILTFMTFN 357


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,452,618
Number of Sequences: 27780
Number of extensions: 315731
Number of successful extensions: 795
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)