Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11m09
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 363 VSNYEPSPILDQRLLKYLLSIYQLCPLVEIC 455
           V  + P P +++RL +   ++  LC   E+C
Sbjct: 198 VGTWSPDPAINRRLKETYSNMCALCEKPEVC 228


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 363 VSNYEPSPILDQRLLKYLLSIYQLCPLVEIC 455
           V  + P P +++RL +   ++  LC   E+C
Sbjct: 198 VGTWSPDPAINRRLKETYSNMCALCEKPEVC 228


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 363 VSNYEPSPILDQRLLKYLLSIYQLCPLVEIC 455
           V  + P P +++RL +   ++  LC   E+C
Sbjct: 198 VGTWSPDPAINRRLKETYSNMCALCEKPEVC 228


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 639 FVNFPAYPIEAIPSKCTLTI 580
           ++  P YP+    SKCT TI
Sbjct: 55  YIYNPRYPLPYSGSKCTWTI 74


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 558 EATKTIDLNGVHMKRSTLSIGW 493
           E  +T    G+H K+  LS+ W
Sbjct: 51  EPAQTTSKAGIHRKKVLLSVWW 72


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 558 EATKTIDLNGVHMKRSTLSIGW 493
           E  +T    G+H K+  LS+ W
Sbjct: 173 EPAQTTSKAGIHRKKVLLSVWW 194


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 580 NRKCTFRRDCFNRVCRK 630
           N++C    DC NRV ++
Sbjct: 475 NKRCNCDIDCINRVVQR 491


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 251 SSLQPSLVREHTYI 292
           SSLQPSL   H+++
Sbjct: 277 SSLQPSLASHHSHL 290


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 564 NNEATKTIDLNGVHMKRSTL 505
           NN  +  ++ NGVH + S L
Sbjct: 217 NNHVSSKVEGNGVHEENSPL 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,056
Number of Sequences: 438
Number of extensions: 3984
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)