Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11m06
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034296-1|AAH34296.1| 233|Homo sapiens chromosome 4 open readi... 132 1e-30
AY349359-1|AAQ56723.1| 250|Homo sapiens unknown protein. 116 8e-26
AK128642-1|BAC87545.1| 156|Homo sapiens protein ( Homo sapiens ... 58 3e-08
BC007288-1|AAH07288.1| 534|Homo sapiens Unknown (protein for IM... 31 2.8
AY235683-1|AAP13542.1| 1067|Homo sapiens PIAS-like protein hZimp... 31 2.8
AL391665-1|CAI40993.2| 1067|Homo sapiens zinc finger, MIZ-type c... 31 2.8
AB033050-1|BAA86538.2| 997|Homo sapiens KIAA1224 protein protein. 31 2.8
>BC034296-1|AAH34296.1| 233|Homo sapiens chromosome 4 open reading
frame 22 protein.
Length = 233
Score = 132 bits (318), Expect = 1e-30
Identities = 77/184 (41%), Positives = 102/184 (55%), Gaps = 3/184 (1%)
Frame = +3
Query: 132 GVEA-DRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTR 308
G++A D + F +E++LDS I DL L AR + LGYR G+ + ++F R
Sbjct: 6 GLKALDNIVTQFNAYEDFLDSQITTVDLYYLEDETLARQLVELGYRGTGERVKREDFEAR 65
Query: 309 RAVINEIVYPTVKAY--VLVSEGVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGF 482
+A I EI +A L S G + D F LA+RE NR G L S+IFIR G
Sbjct: 66 KAAI-EIARLAERAQQKTLTSAGKDLQDNFLTALAMREEDNRSGKLSSVIFIRDRNSHGQ 124
Query: 483 EISGYIDYAHRLVSENWAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYKPLMDPDR 662
EISGYIDYAHRL +E++ +F KK L PR D+ +Y+W SN S NY+ + D
Sbjct: 125 EISGYIDYAHRLKTEDFEVYFTGKKRLLPRPTDISFYNWDADIAVSNSSPNYQVIADNPE 184
Query: 663 GLLF 674
GLLF
Sbjct: 185 GLLF 188
>AY349359-1|AAQ56723.1| 250|Homo sapiens unknown protein.
Length = 250
Score = 116 bits (279), Expect = 8e-26
Identities = 78/201 (38%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Frame = +3
Query: 132 GVEA-DRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTR 308
G++A D + F +E++LDS I DL L AR + LGYR G+ + ++F R
Sbjct: 6 GLKALDNIVTQFNAYEDFLDSQITTVDLYYLEDETLARQLVELGYRGTGERVKREDFEAR 65
Query: 309 RAVINEIVYPTVKAY--VLVSEGVVIDDPFSRELAIRERANRVGILQ------------- 443
+AVI EI +A L S G + D F LA+RE NR G L
Sbjct: 66 KAVI-EIARLAERAQQKTLTSAGKDLQDNFLTALAMREEDNRSGKLSLNQQETDAAHTLK 124
Query: 444 ----SIIFIRHFTKGGFEISGYIDYAHRLVSENWAQFFRSKKMLWPRDKDLGYYHWRHGT 611
S+IFIR G EISGYIDYAHRL +E++ +F KK L PR D+ +Y+W
Sbjct: 125 KQLASVIFIRDGNSHGQEISGYIDYAHRLKTEDFEVYFTGKKRLLPRPTDISFYNWDADI 184
Query: 612 VRSNISRNYKPLMDPDRGLLF 674
SN S NY+ + D GLLF
Sbjct: 185 AVSNSSPNYQVIADNPEGLLF 205
>AK128642-1|BAC87545.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ46801 fis, clone TRACH3032044. ).
Length = 156
Score = 58.0 bits (134), Expect = 3e-08
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +3
Query: 132 GVEA-DRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTR 308
G++A D + F +E++LDS I DL L AR + LGYR G+ + ++F R
Sbjct: 6 GLKALDNIVTQFNAYEDFLDSQITTVDLYYLEDETLARQLVELGYRGTGERVKREDFEAR 65
Query: 309 RAVINEIVYPTVKAY--VLVSEGVVIDDPFSRELAIRERANRVGILQSIIFIRH 464
+A I EI +A L S G + D F LA+RE NR G L + + H
Sbjct: 66 KAAI-EIARLAERAQQKTLTSAGKDLQDNFLTALAMREEDNRSGKLSAGVQWHH 118
>BC007288-1|AAH07288.1| 534|Homo sapiens Unknown (protein for
IMAGE:3347864) protein.
Length = 534
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 243 SSQQLCFSGSSGQRYLSKNLNTPPKSRMAIAYDPLPLPG 127
+ Q FSGSS Y N+N PP+ Y P+PG
Sbjct: 476 NGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPG 514
>AY235683-1|AAP13542.1| 1067|Homo sapiens PIAS-like protein hZimp10
protein.
Length = 1067
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 243 SSQQLCFSGSSGQRYLSKNLNTPPKSRMAIAYDPLPLPG 127
+ Q FSGSS Y N+N PP+ Y P+PG
Sbjct: 476 NGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPG 514
>AL391665-1|CAI40993.2| 1067|Homo sapiens zinc finger, MIZ-type
containing 1 protein.
Length = 1067
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 243 SSQQLCFSGSSGQRYLSKNLNTPPKSRMAIAYDPLPLPG 127
+ Q FSGSS Y N+N PP+ Y P+PG
Sbjct: 476 NGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPG 514
>AB033050-1|BAA86538.2| 997|Homo sapiens KIAA1224 protein protein.
Length = 997
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 243 SSQQLCFSGSSGQRYLSKNLNTPPKSRMAIAYDPLPLPG 127
+ Q FSGSS Y N+N PP+ Y P+PG
Sbjct: 406 NGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPG 444
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,187,399
Number of Sequences: 237096
Number of extensions: 2317229
Number of successful extensions: 5507
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5506
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -