Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11m06
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1635|AAF54909.1|  233|Drosophila melanogaster CG8138-PA...    92   5e-19
AE014134-941|AAF52267.1|  238|Drosophila melanogaster CG14017-PA...    83   3e-16
BT011401-1|AAR96193.1|  241|Drosophila melanogaster AT24369p pro...    73   3e-13
AE014134-940|AAF52266.1|  241|Drosophila melanogaster CG14013-PA...    73   3e-13
AE014134-425|AAF51245.1|  235|Drosophila melanogaster CG3528-PA ...    58   1e-08
AY075219-1|AAL68086.1|  299|Drosophila melanogaster AT16536p pro...    29   5.8  
AF237864-1|AAF44120.1|  313|Drosophila melanogaster Bcl-2-like p...    29   5.8  
AE013599-1336|AAF58628.3|  299|Drosophila melanogaster CG8238-PA...    29   5.8  

>AE014297-1635|AAF54909.1|  233|Drosophila melanogaster CG8138-PA
           protein.
          Length = 233

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
 Frame = +3

Query: 144 DRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTRRAVIN 323
           D  +  F  ++EYL S   + D R L       T+  LGYR +     E EF   +  + 
Sbjct: 3   DFSIAKFNNYQEYLHSFTTVEDFRYLPFHKTVITLTKLGYREHRTFYEEDEFLNVKKQVE 62

Query: 324 EIVYPTVKAYVLVSEGVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFEISGYID 503
           +++ PTV A +  S+     DP    LA RE  N    + +IIF+    + GF  SGYID
Sbjct: 63  QLLNPTVSAQIYYSQYFKGTDPALWALAEREHGNVQQEISTIIFLEISGRSGFSKSGYID 122

Query: 504 YA-----HRLVSEN---WAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYKPLMDPD 659
           +      +R    N   W   F  +K+L P+  D+ +Y W+   + +N + NY  +  P+
Sbjct: 123 FEASLRNYRFKGPNAVDWKAVFEERKLLKPQPSDIVFYDWKTRKIFANDNDNYTVVAHPE 182

Query: 660 RGLLF 674
            GL+F
Sbjct: 183 HGLMF 187


>AE014134-941|AAF52267.1|  238|Drosophila melanogaster CG14017-PA,
           isoform A protein.
          Length = 238

 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 8/201 (3%)
 Frame = +3

Query: 96  MAMAEKKNEYPPGVEADRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANG 275
           M  +++K+    G  A       + +  YL+S + + D R L +      +  L      
Sbjct: 1   MEDSQRKHAGSKGFRALENRKQDIAYNHYLNSFVKLEDRRYLPNDNVIHQLVPLRAAVGT 60

Query: 276 DTLSEKEFYTRRAVINEIVYPTVKAYVLVSEGVVIDDPFSRELAIRERANRVGILQSIIF 455
             ++  +F       NE+ +  +      SE  V +DP +  L  RE+ N    + +I+F
Sbjct: 61  IVMTPTQF-------NEVHFSPLGTCFYFSENNVPNDPLTMALLEREKLNATKTISTIVF 113

Query: 456 IRHFTKGGFEISGYIDYAHRL--------VSENWAQFFRSKKMLWPRDKDLGYYHWRHGT 611
           +      GF ISGYID  H L         S  WA  F  ++ L P  +DL + +W +G 
Sbjct: 114 VSTRDSKGFNISGYIDLEHSLRRYKTAGSKSHPWADIFAGRRRLEPNHQDLSFINWSNGR 173

Query: 612 VRSNISRNYKPLMDPDRGLLF 674
           V SN S NYK + D  +GL F
Sbjct: 174 VHSNDSDNYKVIPDAVKGLCF 194


>BT011401-1|AAR96193.1|  241|Drosophila melanogaster AT24369p
           protein.
          Length = 241

 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
 Frame = +3

Query: 132 GVEADRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTRR 311
           G   D  +L F  + +Y+ S   + D R L +    +T+  LGYR      + +E+  R 
Sbjct: 5   GKSVDFSVLEFDNYNDYISSFATVTDHRYLGNQNTIKTIVQLGYRTTKIPYTAEEYEKRV 64

Query: 312 AVINEIVYPTVKAYVLVSE--GVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFE 485
            +  E + P +    L S+       DP   E   RE  N   IL +I+F  +    G E
Sbjct: 65  DLALEAIRPKLAHVGLFSDLLSPTNRDPVLLEFKARELLNLNKILSTIVFTSYIHMDGSE 124

Query: 486 ISGYID--------YAHRLVSENWAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYK 641
           ISGYID        +   +   +W   F+ +  L P    L Y + R+  V+   S NY+
Sbjct: 125 ISGYIDLDMSWRNCFREAIKHTDWRGVFQGRSRLKPMPHHLSYSNPRYNVVKYTDSDNYQ 184

Query: 642 PLMDPDRGLLF 674
            + D   GL+F
Sbjct: 185 VMHDHHFGLMF 195


>AE014134-940|AAF52266.1|  241|Drosophila melanogaster CG14013-PA
           protein.
          Length = 241

 Score = 73.3 bits (172), Expect = 3e-13
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
 Frame = +3

Query: 132 GVEADRRLLPFVTWEEYLDSLIDIADLRNLRSTAAARTVAALGYRANGDTLSEKEFYTRR 311
           G   D  +L F  + +Y+ S   + D R L +    +T+  LGYR      + +E+  R 
Sbjct: 5   GKSVDFSVLEFDNYNDYISSFATVTDHRYLGNQNTIKTIVQLGYRTTKIPYTAEEYEKRV 64

Query: 312 AVINEIVYPTVKAYVLVSE--GVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFE 485
            +  E + P +    L S+       DP   E   RE  N   IL +I+F  +    G E
Sbjct: 65  DLALEAIRPKLAHVGLFSDLLSPTNRDPVLLEFKARELLNLNKILSTIVFTSYIHMDGSE 124

Query: 486 ISGYID--------YAHRLVSENWAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYK 641
           ISGYID        +   +   +W   F+ +  L P    L Y + R+  V+   S NY+
Sbjct: 125 ISGYIDLDMSWRNCFREAIKHTDWRGVFQGRSRLKPMPHHLSYSNPRYNVVKYTDSDNYQ 184

Query: 642 PLMDPDRGLLF 674
            + D   GL+F
Sbjct: 185 VMHDHHFGLMF 195


>AE014134-425|AAF51245.1|  235|Drosophila melanogaster CG3528-PA
           protein.
          Length = 235

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 12/185 (6%)
 Frame = +3

Query: 153 LLPFVTWEEYLDSLIDIADLRNLRSTAAARTVA--ALGYRANGDTLSEKEFYTRRAVINE 326
           L+ F  +++Y+DS I I D R L +    R +   A G    G+ L+ ++FY R+     
Sbjct: 3   LINFNHYQDYVDSFITIQDTRYLGNKEIQRNLIQNACGKNCLGNLLTREQFYQRKEKELV 62

Query: 327 IVYPT-VKAYVLVSEGVVIDDPFSRELAIRERANRVGILQSIIFIRHFTKGGFEISGYID 503
           ++ P  ++   L  + +   D   ++ A RE+      + +++++   +K G EIS ++D
Sbjct: 63  LLKPRGLRGLQLFGDYLNNKDEVLQQFANREKKLLEKQISTVVYLVMRSKKGLEISSFLD 122

Query: 504 YAHRLVS---EN------WAQFFRSKKMLWPRDKDLGYYHWRHGTVRSNISRNYKPLMDP 656
               L     EN      W   F  +  L P +  L Y+ W    V  N S N++ L   
Sbjct: 123 LEQSLRESRFENSTSCVDWRAIFEGRTKLRPSNLHLSYFDWHQNRVSFNNSDNFRVLNKR 182

Query: 657 DRGLL 671
              LL
Sbjct: 183 PHSLL 187


>AY075219-1|AAL68086.1|  299|Drosophila melanogaster AT16536p
           protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 425 QGRDFTVHYIHSTLHKRGLRN--IRLHRLRTSLGLGELGSVLQI 550
           QGR    HYI   L + GL N  + L R+R+ LG   +G V  +
Sbjct: 92  QGRCLCGHYIKRRLRRSGLFNKKLGLQRIRSILGSTSMGIVRDV 135


>AF237864-1|AAF44120.1|  313|Drosophila melanogaster Bcl-2-like
           protein BUFFY protein.
          Length = 313

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 425 QGRDFTVHYIHSTLHKRGLRN--IRLHRLRTSLGLGELGSVLQI 550
           QGR    HYI   L + GL N  + L R+R+ LG   +G V  +
Sbjct: 106 QGRCLCGHYIKRRLRRSGLFNKKLGLQRIRSILGSTSMGIVRDV 149


>AE013599-1336|AAF58628.3|  299|Drosophila melanogaster CG8238-PA
           protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 425 QGRDFTVHYIHSTLHKRGLRN--IRLHRLRTSLGLGELGSVLQI 550
           QGR    HYI   L + GL N  + L R+R+ LG   +G V  +
Sbjct: 92  QGRCLCGHYIKRRLRRSGLFNKKLGLQRIRSILGSTSMGIVRDV 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,584,850
Number of Sequences: 53049
Number of extensions: 710624
Number of successful extensions: 1890
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)