Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11m02
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z49910-6|CAH04715.1| 124|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 48 8e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 1e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 42 3e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 42 3e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 41 7e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 41 7e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 41 0.001
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 41 0.001
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 41 0.001
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 41 0.001
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 40 0.002
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 40 0.002
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 40 0.002
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 40 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.004
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.004
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 38 0.009
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 38 0.009
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.027
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.027
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.061
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.061
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 34 0.11
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.11
U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical pr... 33 0.19
U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 33 0.25
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 33 0.25
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 32 0.33
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.33
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 32 0.33
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 32 0.33
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 32 0.33
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 32 0.43
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 32 0.43
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.43
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 32 0.43
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 32 0.43
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.43
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.43
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.57
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.57
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.57
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 31 0.57
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.3
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 30 1.3
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 30 1.3
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 30 1.3
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 30 1.3
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 29 2.3
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 29 2.3
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 29 2.3
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 29 2.3
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 29 2.3
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 29 2.3
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 29 2.3
Z66519-10|CAD59139.1| 446|Caenorhabditis elegans Hypothetical p... 29 3.0
Z66519-9|CAA91380.1| 448|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z72514-8|CAA96677.3| 416|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical pr... 29 4.0
U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiestera... 29 4.0
U00058-1|AAL02529.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z48045-3|CAA88104.1| 342|Caenorhabditis elegans Hypothetical pr... 28 5.3
AC090999-16|AAP46261.1| 304|Caenorhabditis elegans Hypothetical... 28 5.3
AC024779-2|AAK68485.1| 299|Caenorhabditis elegans Serpentine re... 28 5.3
AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine re... 28 5.3
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 27 9.3
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 104 bits (249), Expect = 7e-23
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 25/208 (12%)
Frame = +1
Query: 130 EYVKVSEDEDENNAVEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDG-- 303
E++ V +D + + +E+P VDG +L++TL A FPG GLKY++P + + R +++
Sbjct: 46 EFITV-QDPNGDEPIELPT-VDGVVLMTTLQASFPGATGLKYKNPKTGANRAVQVDPSGL 103
Query: 304 KLHPPSEVGW-GKNLYVCVFPKENK--------------RKM-------EDVSTDNSAAK 417
KL P++ GW K +V V P+ + RK+ D D + +
Sbjct: 104 KLIAPAD-GWENKTFFVIVAPQSERVRALSSADATSAKRRKVGSSDDSDSDDGRDGRSGR 162
Query: 418 TKRLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFAT 597
+ +E+ DLI LG+ +K+T+E ++YFE G VV ++K+ G KGFGF+R ++
Sbjct: 163 KRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS 222
Query: 598 YASQMRALA-QRHNIDGRWVXVRIPNSK 678
Q + LA +H IDGR V++P+ +
Sbjct: 223 VGEQNKVLAIPQHMIDGRRCDVKVPDGR 250
>Z49910-6|CAH04715.1| 124|Caenorhabditis elegans Hypothetical
protein F44G4.4b protein.
Length = 124
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +1
Query: 130 EYVKVSEDEDENNAVEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRL--SDG 303
E++ V +D + + +E+P VDG +L++TL A FPG GLKY++P + + R +++ S
Sbjct: 46 EFITV-QDPNGDEPIELPT-VDGVVLMTTLQASFPGATGLKYKNPKTGANRAVQVDPSGL 103
Query: 304 KLHPPSEVGW-GKNLYVCVFP 363
KL P++ GW K +V V P
Sbjct: 104 KLIAPAD-GWENKTFFVIVAP 123
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 454 LICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQ 627
LI LP TE+ ++++FE++G++ LK K G F+GF F+ F S ALA+
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 430 EKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKD-KSGCFKGFGFIRF 591
EK L L LP+ + E+ ++ F+++GEV VQ+ D K+G KGF + F
Sbjct: 273 EKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKD-KSGCFKGFGFIRFATYASQMRALAQR-HNI 639
GL W++T E+++ YF +FGEV + +D + +GFGFI F +S + L R H +
Sbjct: 51 GLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHEL 110
Query: 640 DGRWVXVRI 666
DG+ + ++
Sbjct: 111 DGKKIDPKV 119
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 373 KRKMEDVSTDNSAAKTKRLEKKLTCSD--LICLGLPWKSTEESIKQYFEQFGEVVMVQLK 546
+ +++ D A KR + KL + GL ST E +KQYFE +G+V L
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLM 166
Query: 547 KDK-SGCFKGFGFIRF-ATYASQMRALAQRHNIDGRWV 654
DK + +GFGF+ F + + H I+G+ V
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKD-KSGCFKGFGFIRFATYASQMRALAQR-HNI 639
GL W++T E+++ YF +FGEV + +D + +GFGFI F +S + L R H +
Sbjct: 51 GLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHEL 110
Query: 640 DGRWVXVRI 666
DG+ + ++
Sbjct: 111 DGKKIDPKV 119
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 373 KRKMEDVSTDNSAAKTKRLEKKLTCSD--LICLGLPWKSTEESIKQYFEQFGEVVMVQLK 546
+ +++ D A KR + KL + GL ST E +KQYFE +G+V L
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLM 166
Query: 547 KDK-SGCFKGFGFIRF-ATYASQMRALAQRHNIDGRWV 654
DK + +GFGF+ F + + H I+G+ V
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = +1
Query: 307 LHPPSEVGWGKNLYVCVFPKENKRKMEDVSTDNSAAKTKRLEKKLTCSDLICLGLPWKST 486
LH + G L+VC K+++R E + + K +R++K + L L
Sbjct: 272 LHDSTIEGTDLKLHVCRAQKKSERHAE-LKKKHEQHKAERMQKYQGVN-LYVKNLDETVD 329
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
++ +K+ FE +G + ++ D++G KGFGF+ F
Sbjct: 330 DDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 364
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 490 ESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
+SI F FG ++ ++ D+ G KG+GF+ F T + A+
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAI 177
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHN 636
+E++++ F +FG + ++ + G KGFGF+ FA A+ H+
Sbjct: 226 KETLEKVFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHD 274
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = +1
Query: 307 LHPPSEVGWGKNLYVCVFPKENKRKMEDVSTDNSAAKTKRLEKKLTCSDLICLGLPWKST 486
LH + G L+VC K+++R E + + K +R++K + L L
Sbjct: 212 LHDSTIEGTDLKLHVCRAQKKSERHAE-LKKKHEQHKAERMQKYQGVN-LYVKNLDETVD 269
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
++ +K+ FE +G + ++ D++G KGFGF+ F
Sbjct: 270 DDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 304
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHN 636
+E++++ F +FG + ++ + G KGFGF+ FA A+ H+
Sbjct: 166 KETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHD 214
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = +1
Query: 307 LHPPSEVGWGKNLYVCVFPKENKRKMEDVSTDNSAAKTKRLEKKLTCSDLICLGLPWKST 486
LH + G L+VC K+++R E + + K +R++K + L L
Sbjct: 209 LHDSTIEGTDLKLHVCRAQKKSERHAE-LKKKHEQHKAERMQKYQGVN-LYVKNLDETVD 266
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
++ +K+ FE +G + ++ D++G KGFGF+ F
Sbjct: 267 DDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 301
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 490 ESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
+SI F FG ++ ++ D+ G KG+GF+ F T + A+
Sbjct: 71 KSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAI 114
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHN 636
+E++++ F +FG + ++ + G KGFGF+ FA A+ H+
Sbjct: 163 KETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHD 211
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = +1
Query: 307 LHPPSEVGWGKNLYVCVFPKENKRKMEDVSTDNSAAKTKRLEKKLTCSDLICLGLPWKST 486
LH + G L+VC K+++R E + + K +R++K + L L
Sbjct: 272 LHDSTIEGTDLKLHVCRAQKKSERHAE-LKKKHEQHKAERMQKYQGVN-LYVKNLDETVD 329
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
++ +K+ FE +G + ++ D++G KGFGF+ F
Sbjct: 330 DDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCF 364
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 490 ESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
+SI F FG ++ ++ D+ G KG+GF+ F T + A+
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAI 177
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHN 636
+E++++ F +FG + ++ + G KGFGF+ FA A+ H+
Sbjct: 226 KETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHD 274
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 472 PWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHNID-- 642
P+++TE+ + YF Q G V V++ D+ +G +GF F+ F A+ RA+ Q + +D
Sbjct: 12 PFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFN 71
Query: 643 GRWVXVRIPNSK 678
GR + V + ++
Sbjct: 72 GRALRVNLAQNR 83
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQR-HNI 639
G+ + E + +F Q+GEV Q+K D++ G +GF F+ F T ALA R I
Sbjct: 35 GISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTI 94
Query: 640 DGRWVXVRIPNSK 678
G+ V V+ S+
Sbjct: 95 KGKSVEVKPAKSR 107
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQ 627
GLP +E+ ++ +FEQFG+V ++ DK + + F FI F S +A +Q
Sbjct: 116 GLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQR-HNI 639
G+ + E + +F Q+GEV Q+K D++ G +GF F+ F T ALA R I
Sbjct: 35 GISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTI 94
Query: 640 DGRWVXVRIPNSK 678
G+ V V+ S+
Sbjct: 95 KGKSVEVKPAKSR 107
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQ 627
GLP +E+ ++ +FEQFG+V ++ DK + + F FI F S +A +Q
Sbjct: 116 GLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHNI-- 639
+P++ TEE I YF G V V++ D+ +G +GF F+ F+ A RA+ Q + +
Sbjct: 13 VPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAF 72
Query: 640 DGRWVXVRIPN 672
+GR + V N
Sbjct: 73 NGRNLRVNYAN 83
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFAT--YASQMRALAQR 630
G P +TE ++++FE+F V V++ K G KG+GFI F T A ++R L +
Sbjct: 72 GFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLTPK 128
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFAT--YASQMRALAQR 630
G P +TE ++++FE+F V V++ K G KG+GFI F T A ++R L +
Sbjct: 73 GFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLTPK 129
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGC-FKGFGFIRFATYASQMRALAQR-HNI 639
GL +T++ +++++ QFGE+ + + +D + +GFGF+ F+ A+ QR H I
Sbjct: 29 GLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88
Query: 640 DGRWV 654
DG+ V
Sbjct: 89 DGKTV 93
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 424 RLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCF-KGFGFIRFATY 600
R E ++ L G+ TE+ + +YF ++G V ++ DK+ +GFGF+ F +
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDH 165
Query: 601 ASQMRALAQR-HNIDGRWVXVRIPNSK 678
S + + Q+ H ++G VR SK
Sbjct: 166 DSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHN-I 639
GLP+ ++++++ +YFEQFG++ + D+ + +G+GF+ AS RA + I
Sbjct: 41 GLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPII 100
Query: 640 DGRWVXVRI 666
DGR V +
Sbjct: 101 DGRKANVNL 109
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGC-FKGFGFIRFATYASQMRALAQR-HNI 639
GL +T++ +++++ QFGE+ + + +D + +GFGF+ F+ A+ QR H I
Sbjct: 29 GLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88
Query: 640 DGRWV 654
DG+ V
Sbjct: 89 DGKTV 93
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 424 RLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCF-KGFGFIRFATY 600
R E ++ L G+ TE+ + +YF ++G V ++ DK+ +GFGF+ F +
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDH 165
Query: 601 ASQMRALAQR-HNIDGRWVXVRIPNSK 678
S + + Q+ H ++G VR SK
Sbjct: 166 DSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGC-FKGFGFIRFATYASQMRALAQR-HNI 639
GL +T++ +++++ QFGE+ + + +D + +GFGF+ F+ A+ QR H I
Sbjct: 29 GLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHII 88
Query: 640 DGRWV 654
DG+ V
Sbjct: 89 DGKTV 93
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 424 RLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCF-KGFGFIRFATY 600
R E ++ L G+ TE+ + +YF ++G V ++ DK+ +GFGF+ F +
Sbjct: 106 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDH 165
Query: 601 ASQMRALAQR-HNIDGRWVXVRIPNSK 678
S + + Q+ H ++G VR SK
Sbjct: 166 DSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVV-MVQLKKDKSGCFKGFGFIRFATYASQMRALAQR-HNI 639
GL +T+E + YF Q+G VV + ++ + +GFGF+ FA+ S A+ R H +
Sbjct: 55 GLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKL 114
Query: 640 DGRWV 654
G+ V
Sbjct: 115 GGKTV 119
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVV-MVQLKKDKSGCFKGFGFIRFATYASQMRALAQR-HNI 639
GL +T+E + YF Q+G VV + ++ + +GFGF+ FA+ S A+ R H +
Sbjct: 75 GLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKL 134
Query: 640 DGRWV 654
G+ V
Sbjct: 135 GGKTV 139
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVV-MVQLKKDKSGCFKGFGFIRFATYASQMRALAQR-HNI 639
GL +T+E + YF Q+G VV + ++ + +GFGF+ FA+ S A+ R H +
Sbjct: 76 GLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKL 135
Query: 640 DGRWV 654
G+ V
Sbjct: 136 GGKTV 140
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 412 AKTKRLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIR 588
A T ++K + + WKST I+++F G+V V + KDK +G K F F+
Sbjct: 34 APTAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVE 93
Query: 589 FATYASQMRAL 621
F S AL
Sbjct: 94 FQKLESVQLAL 104
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHN--I 639
L +++T +++ FE++G++ V + +DK S KGFGF+RF AL + +
Sbjct: 26 LSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLV 85
Query: 640 DGRWVXVRI 666
DGR + V +
Sbjct: 86 DGRELRVTL 94
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHN--I 639
L +++T +++ FE++G++ V + +DK S KGFGF+RF AL + +
Sbjct: 26 LSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLV 85
Query: 640 DGRWVXVRI 666
DGR + V +
Sbjct: 86 DGRELRVTL 94
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 424 RLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCF-KGFGFIRFATY 600
R E ++ L G+ TE+ + +YF ++G V ++ DK+ +GFGF+ F +
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDH 127
Query: 601 ASQMRALAQR-HNIDGRWVXVRIPNSK 678
S + + Q+ H ++G VR SK
Sbjct: 128 DSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 496 IKQYFEQFGEVVMVQLKKDKSGC-FKGFGFIRFATYASQMRALAQR-HNIDGRWV 654
+++++ QFGE+ + + +D + +GFGF+ F+ A+ QR H IDG+ V
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 55
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 424 RLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCF-KGFGFIRFATY 600
R E ++ L G+ TE+ + +YF ++G V ++ DK+ +GFGF+ F +
Sbjct: 68 RSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDH 127
Query: 601 ASQMRALAQR-HNIDGRWVXVRIPNSK 678
S + + Q+ H ++G VR SK
Sbjct: 128 DSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 35.1 bits (77), Expect = 0.046
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 496 IKQYFEQFGEVVMVQLKKDKSGC-FKGFGFIRFATYASQMRALAQR-HNIDGRWV 654
+++++ QFGE+ + + +D + +GFGF+ F+ A+ QR H IDG+ V
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 55
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/96 (25%), Positives = 46/96 (47%)
Frame = +1
Query: 304 KLHPPSEVGWGKNLYVCVFPKENKRKMEDVSTDNSAAKTKRLEKKLTCSDLICLGLPWKS 483
KL+ G L VC K+++R E + A K +R+++ + L +
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKKSERSAE-LKRKYEALKQERVQRYQGVN-LYVKNIEEDL 354
Query: 484 TEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
++ ++ +F FG + ++ D++G KGFGF+ F
Sbjct: 355 NDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCF 390
Score = 34.3 bits (75), Expect = 0.081
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFA 594
+E + F +FGE+ + D G KGFGF+ FA
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 490 ESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
+S+ F FG ++ ++ D G KG+GF+ F T S A+
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAI 202
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/96 (25%), Positives = 46/96 (47%)
Frame = +1
Query: 304 KLHPPSEVGWGKNLYVCVFPKENKRKMEDVSTDNSAAKTKRLEKKLTCSDLICLGLPWKS 483
KL+ G L VC K+++R E + A K +R+++ + L +
Sbjct: 297 KLNDSILEGTDCKLSVCRAQKKSERSAE-LKRKYEALKQERVQRYQGVN-LYVKNIEEDL 354
Query: 484 TEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
++ ++ +F FG + ++ D++G KGFGF+ F
Sbjct: 355 NDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCF 390
Score = 34.3 bits (75), Expect = 0.081
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFA 594
+E + F +FGE+ + D G KGFGF+ FA
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 490 ESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
+S+ F FG ++ ++ D G KG+GF+ F T S A+
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAI 202
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 448 SDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALA 624
++LI LP T+E ++ F GE+ +L +DK +G G+GF+ + +RA++
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 448 SDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRF 591
S+L G+P T ++ F FG+++ ++ D +G KG GF+RF
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 502 QYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRH--NIDGRWVXVRIPNS 675
Q F QFG +V V++ +D + KG+ F+ + Y A+ + N+ G+ + V +S
Sbjct: 392 QLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSS 451
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHN 636
+P E+ ++ FEQFG++ + KDK +G KG F+ + S +R A H+
Sbjct: 36 IPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHD 92
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHN 636
+P E+ ++ FEQFG++ + KDK +G KG F+ + S +R A H+
Sbjct: 36 IPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLHD 92
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.061
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRH--NID 642
+P+K E + FE+ G VV V++ ++ G KGFGF+ RA A+ + I+
Sbjct: 107 IPFKYREPDLTAMFEKVGPVVDVEIIFNERGS-KGFGFVTMQNPDDADRARAEFNGTTIE 165
Query: 643 GRWVXVRIPNSK 678
GR V V + +
Sbjct: 166 GRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.061
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRH--NID 642
+P+K E + FE+ G VV V++ ++ G KGFGF+ RA A+ + I+
Sbjct: 107 IPFKYREPDLTAMFEKVGPVVDVEIIFNERGS-KGFGFVTMQNPDDADRARAEFNGTTIE 165
Query: 643 GRWVXVRIPNSK 678
GR V V + +
Sbjct: 166 GRRVEVNLATQR 177
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 481 STEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRALAQRHN-IDGRWV 654
+T E I+Q+F G V V ++ D+ SG KGF ++ F ALA + + GR +
Sbjct: 89 ATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQI 148
Query: 655 XV 660
V
Sbjct: 149 KV 150
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDK-SGCFKGFGFIRFATYASQMRAL 621
GL + +E + F Q+GEV+ + L +DK +G KGF F+ + S + A+
Sbjct: 44 GLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAV 96
>U41543-4|AAM69116.1| 575|Caenorhabditis elegans Hypothetical
protein F46H5.7b protein.
Length = 575
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 160 ENNAVEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDGKLHPPSEVGW 333
E V++ + D TL +T+ + PG GL YR + + GK++PP GW
Sbjct: 17 EIEPVQVSHDQDATLNFATVQSVVPGAHGLYYRDDGERKALLFDNNTGKVYPPPN-GW 73
>U41543-3|AAB37024.1| 572|Caenorhabditis elegans Hypothetical
protein F46H5.7a protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 160 ENNAVEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDGKLHPPSEVGW 333
E V++ + D TL +T+ + PG GL YR + + GK++PP GW
Sbjct: 17 EIEPVQVSHDQDATLNFATVQSVVPGAHGLYYRDDGERKALLFDNNTGKVYPPPN-GW 73
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 442 TCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
T ++ C GLPW++TE+ ++ +F G + +++ + ++G G + F AL
Sbjct: 3 TAYEVQCRGLPWEATEQELRDFFGNNG-IESLEIPR-RNGRTSGDAKVVFTNEEDYNNAL 60
Query: 622 AQ-RHNIDGRWVXV 660
+ R ++ R++ V
Sbjct: 61 KKDREHLGSRYIEV 74
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 442 TCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRAL 621
T ++ C GLPW++TE+ ++ +F G + +++ + ++G G + F AL
Sbjct: 3 TAYEVQCRGLPWEATEQELRDFFGNNG-IESLEIPR-RNGRTSGDAKVVFTNEEDYNNAL 60
Query: 622 AQ-RHNIDGRWVXV 660
+ R ++ R++ V
Sbjct: 61 KKDREHLGSRYIEV 74
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 484 TEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHNID 642
TE+ I+Q F FG + V++ K +G+ F++F + +A+ Q +N D
Sbjct: 139 TEDEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQD 186
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 484 TEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHNID 642
TE+ I+Q F FG + V++ K +G+ F++F + +A+ Q +N D
Sbjct: 149 TEDEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQD 196
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 484 TEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHNID 642
TE+ I+Q F FG + V++ K +G+ F++F + +A+ Q +N D
Sbjct: 252 TEDEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQD 299
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 484 TEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHNID 642
TE+ I+Q F FG + V++ K +G+ F++F + +A+ Q +N D
Sbjct: 220 TEDEIRQGFASFGRITEVRIFK-----MQGYAFVKFDNKDAAAKAIVQMNNQD 267
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 484 TEESIKQYFEQFGEVVMVQLKKD-KSGCFKGFGFIRF 591
TE+ + F FG+VV + + D +SG +GFGF+ F
Sbjct: 23 TEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 478 KSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRH 633
K ++E I++ + G V + K +G +GFGF F +RAL H
Sbjct: 57 KCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILH 108
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 478 KSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRH 633
K ++E I++ + G V + K +G +GFGF F +RAL H
Sbjct: 57 KCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILH 108
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +1
Query: 172 VEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDGKLHPPSEVGWGKNLYV 351
VE+ + D +L ++L FPG G+ YR + ++ K P + +V
Sbjct: 19 VEVELDEDAGILWTSLQTAFPGCSGMYYREIGDSCKKSVKFDGKKFMAPGGAWNDREYFV 78
Query: 352 CVFPKENKRKMEDVSTDNSAAKTKRLEKKL 441
+ + + T + + TK+ EK +
Sbjct: 79 TLSQRCHTAAGNSGHTASYSDATKQFEKSV 108
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +1
Query: 172 VEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDGKLHPPSEVGWGKNLYV 351
VE+ + D +L ++L FPG G+ YR + ++ K P + +V
Sbjct: 19 VEVELDEDAGILWTSLQTAFPGCSGMYYREIGDSCKKSVKFDGKKFMAPGGAWNDREYFV 78
Query: 352 CVFPKENKRKMEDVSTDNSAAKTKRLEKKL 441
+ + + T + + TK+ EK +
Sbjct: 79 TLSQRCHTAAGNSGHTASYSDATKQFEKSV 108
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +1
Query: 172 VEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDGKLHPPSEVGWGKNLYV 351
VE+ + D +L ++L FPG G+ YR + ++ K P + +V
Sbjct: 19 VEVELDEDAGILWTSLQTAFPGCSGMYYREIGDSCKKSVKFDGKKFMAPGGAWNDREYFV 78
Query: 352 CVFPKENKRKMEDVSTDNSAAKTKRLEKKL 441
+ + + T + + TK+ EK +
Sbjct: 79 TLSQRCHTAAGNSGHTASYSDATKQFEKSV 108
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +1
Query: 172 VEIPCEVDGTLLLSTLVAQFPGTCGLKYRHPDSKSVRGIRLSDGKLHPPSEVGWGKNLYV 351
VE+ + D +L ++L FPG G+ YR + ++ K P + +V
Sbjct: 19 VEVELDEDAGILWTSLQTAFPGCSGMYYREIGDSCKKSVKFDGKKFMAPGGAWNDREYFV 78
Query: 352 CVFPKENKRKMEDVSTDNSAAKTKRLEKKL 441
+ + + T + + TK+ EK +
Sbjct: 79 TLSQRCHTAAGNSGHTASYSDATKQFEKSV 108
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 478 KSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHNID--GRW 651
K E+ I+ FE FG + + L+ D + +GF I F ++ Q +N + GR
Sbjct: 137 KIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRC 196
Query: 652 VXVRI 666
+ + I
Sbjct: 197 IRLSI 201
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 478 KSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYASQMRALAQRHNID--GRW 651
K E+ I+ FE FG + + L+ D + +GF I F ++ Q +N + GR
Sbjct: 282 KIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQLNNFELAGRC 341
Query: 652 VXVRI 666
+ + I
Sbjct: 342 IRLSI 346
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQR 630
GLP T E I Q F +FG V++V + D+ G KG + F ++ RAL ++
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 380
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQR 630
GLP T E I Q F +FG V++V + D+ G KG + F ++ RAL ++
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 380
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQR 630
GLP T E I Q F +FG V++V + D+ G KG + F ++ RAL ++
Sbjct: 111 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 166
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQR 630
GLP T E I Q F +FG V++V + D+ G KG + F ++ RAL ++
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKK 380
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/42 (28%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKD-KSGCFKGFGFIRF 591
+P+ E+ + YF QFG V+ +++ ++ ++G KG+ ++ F
Sbjct: 39 IPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGF 80
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
GLP TE+ +K+ FG + L D G KG+ F +
Sbjct: 297 GLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
GLP TE+ +K+ FG + L D G KG+ F +
Sbjct: 297 GLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
GLP TE+ +K+ FG + L D G KG+ F +
Sbjct: 272 GLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 466 GLPWKSTEESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRF 591
GLP TE+ +K+ FG + L D G KG+ F +
Sbjct: 275 GLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEY 316
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 469 LPWKSTEESIKQYFEQFGEVVMVQLKKDKS-GCFKGFGFIRFATYASQMRALAQRHNI 639
+P + E ++ FE++G V + +DKS KG F+ F + A HNI
Sbjct: 62 IPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGALHNI 119
>Z66519-10|CAD59139.1| 446|Caenorhabditis elegans Hypothetical
protein B0334.11b protein.
Length = 446
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 103 KSGYNEDLFEYVKVSEDEDENNAVEIPCEVDGTLL 207
+S +DL + SEDEDE E P ++D T L
Sbjct: 407 ESSLEDDLSLLGESSEDEDEEKVNESPAKIDSTTL 441
>Z66519-9|CAA91380.1| 448|Caenorhabditis elegans Hypothetical
protein B0334.11a protein.
Length = 448
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 103 KSGYNEDLFEYVKVSEDEDENNAVEIPCEVDGTLL 207
+S +DL + SEDEDE E P ++D T L
Sbjct: 409 ESSLEDDLSLLGESSEDEDEEKVNESPAKIDSTTL 443
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 361 PKENKRKMEDVSTDNSAAKTKRLEKK-LTCSDLICLGLPWKSTEESIKQYFEQFGEVVMV 537
P+ ++ ++T+ A+ +L+++ ++L LP TE+ ++ +FG V+
Sbjct: 158 PQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVIST 217
Query: 538 QLKKDKSGCFKGFGFIR 588
++ + +G GF R
Sbjct: 218 RILRTPDNQSRGVGFAR 234
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 361 PKENKRKMEDVSTDNSAAKTKRLEKK-LTCSDLICLGLPWKSTEESIKQYFEQFGEVVMV 537
P+ ++ ++T+ A+ +L+++ ++L LP TE+ ++ +FG V+
Sbjct: 132 PQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVIST 191
Query: 538 QLKKDKSGCFKGFGFIR 588
++ + +G GF R
Sbjct: 192 RILRTPDNQSRGVGFAR 208
>Z72514-8|CAA96677.3| 416|Caenorhabditis elegans Hypothetical
protein T10B10.5 protein.
Length = 416
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 380 LRLFSFGKTQTYKFLPQPTSLGGCNFPSLRRIPRTDLES 264
LR + +T T P P S G +FPS IP+ DL S
Sbjct: 60 LRCTTIYRTNTDDATPNPESKLGESFPSTSSIPKGDLTS 98
>Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical
protein C07A9.4 protein.
Length = 590
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 192 YFTRYLHSIIFVFIFTDFYVF 130
YF R +HS VFI+ F+VF
Sbjct: 558 YFLRRIHSYSLVFIYISFFVF 578
>U80032-1|AAB53879.2| 568|Caenorhabditis elegans Phosphodiesterase
protein 5 protein.
Length = 568
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +1
Query: 370 NKRKMEDVSTDNSAAKTKRLEKKL-------TCSDLICLGLPWKSTEESIKQYFEQF 519
NK K+ +V DN+ R E +L T DL+ PW E++K FE+F
Sbjct: 459 NKAKL-NVILDNNTFDINRQEHRLLTQAVMMTGCDLVASAKPWNIQTETVKVIFEEF 514
>U00058-1|AAL02529.2| 241|Caenorhabditis elegans Hypothetical
protein W03A5.2 protein.
Length = 241
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 106 SGYNEDLFEYVKVSEDED 159
+GYNE +FE VSEDED
Sbjct: 212 TGYNERVFESCDVSEDED 229
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/39 (28%), Positives = 26/39 (66%)
Frame = +1
Query: 487 EESIKQYFEQFGEVVMVQLKKDKSGCFKGFGFIRFATYA 603
+++ K+++EQFG+ + + + +D + K F+R++T A
Sbjct: 402 KDNFKKFYEQFGKNLKLGIHEDSTNRKKLSDFLRYSTSA 440
>Z48045-3|CAA88104.1| 342|Caenorhabditis elegans Hypothetical
protein C41C4.6 protein.
Length = 342
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 55 GTNSKRGDFKVEIMGSKSGYNEDLFEYVKVSEDEDENN 168
G+N + DF+ + +S EDL + + EDE++N+
Sbjct: 62 GSNDQHMDFEEDDFDMESSMTEDLVDEDEEEEDEEDND 99
>AC090999-16|AAP46261.1| 304|Caenorhabditis elegans Hypothetical
protein Y82E9BR.14b protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 344 YTFAFFRKKINVKWRTSRQIIRLPKLN 424
+ AFF KK+N W+ ++ +I+ P +
Sbjct: 74 FFLAFFEKKLNFSWKNTKILIKNPNFS 100
>AC024779-2|AAK68485.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform a protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 177 LHSIIFVFIFTDFYVFE*IFIISTFAAHYFHFKITTLRIST 55
+HS +F FIF+ F + I+ T+++ + H + IST
Sbjct: 33 IHSTVFAFIFSPMCFFS-VEIMKTYSSAFGHILLIAYDIST 72
>AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform b protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 177 LHSIIFVFIFTDFYVFE*IFIISTFAAHYFHFKITTLRIST 55
+HS +F FIF+ F + I+ T+++ + H + IST
Sbjct: 44 IHSTVFAFIFSPMCFFS-VEIMKTYSSAFGHILLIAYDIST 83
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 463 LGLPWKSTEESIKQYFEQFGEVVMVQLKK 549
+G+ WK E K+++E EVV V+ K
Sbjct: 1483 VGIEWKKLSEEQKKHYEMRAEVVAVEKAK 1511
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 463 LGLPWKSTEESIKQYFEQFGEVVMVQLKK 549
+G+ WK E K+++E EVV V+ K
Sbjct: 1483 VGIEWKKLSEEQKKHYEMRAEVVAVEKAK 1511
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 463 LGLPWKSTEESIKQYFEQFGEVVMVQLKK 549
+G+ WK E K+++E EVV V+ K
Sbjct: 113 VGIEWKKLSEEQKKHYEMRAEVVAVEKAK 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,501,288
Number of Sequences: 27780
Number of extensions: 296443
Number of successful extensions: 1023
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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