Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l24
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 30 0.34
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb... 27 3.2
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 27 3.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 5.5
SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family |Schizos... 26 5.5
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.5
SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC su... 25 7.3
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 25 9.7
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 25 9.7
SPBC11B10.07c |||CDC50 domain protein|Schizosaccharomyces pombe|... 25 9.7
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 29.9 bits (64), Expect = 0.34
Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 514 NFSFAKFDEKRNMQLIALLY--KLHYVFYLLHNNMISLKITVFFLNNEDMQLLFPKTVLM 341
NF F + K N IA LY +LH F L HN+ FFL +L KTVL
Sbjct: 349 NFRFHTVEPKNN---IAKLYDPRLHLFFSLRHNSFFESYFIYFFLAK---LILLKKTVLS 402
Query: 340 L 338
L
Sbjct: 403 L 403
>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 519
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 484 RNMQLIALLYKLHYVFYLLHNNMISLKITVFFLNNEDMQLL 362
+NM+ + +++ L V ++ + + LK T F L+NE + L+
Sbjct: 277 KNMRQLLIVHTLGKVGFVANETLTLLKATEFGLSNEMLSLI 317
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 447 CNLYNNAISCMLRFSSNLAKLKFSSNPQIILELRDLYQS 563
CN CM + SNL++LK SS ++ L+ + S
Sbjct: 286 CNYETEITDCMEKLQSNLSELK-SSRKSSLISLKSFWLS 323
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 5.5
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 231 IIKHQS*FM*IPNPELSIDSYEDTKAKSKTGC---NSSVNIKTVLGNSNCMSSLF 386
I+K S F + N +L D YE +AK+ + N SV KT L +N SSLF
Sbjct: 15 IVKEISSFGSLTNIDLHTDPYEKVEAKALSRSRLKNQSVK-KTDLRITNDYSSLF 68
>SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 209
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 594 MKRARDVGT*YFDKDPSIPILSVDLTR 514
MKR R+ Y + P +PI+ DL R
Sbjct: 55 MKRCRETIAPYLELKPEVPIVYTDLIR 81
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -3
Query: 269 IRNSHKSGL---MFYYLYKLHCYTLSIYSLLLT 180
+ SH+S L +FY +Y L CYT +I L L+
Sbjct: 338 VLTSHESRLSKRVFYSVYVLACYTSTIVGLPLS 370
>SPAC17H9.20 |psc3|SPAC607.01|mitotic cohesin complex, non-SMC
subunit Psc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 427 HNNMISLKITVFFLNNEDMQLLFPKTVLMLTL 332
H ++ + FFL N D+Q++ T+L L L
Sbjct: 652 HFELLINNLKKFFLTNNDLQIIQGCTILFLRL 683
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 15 RLNWSSNVDTRKTFSVSFTHICR 83
R WS+ +D+ ++F VSF IC+
Sbjct: 495 RNEWSNFLDSVQSFPVSFHSICK 517
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 561 FDKDPSIPILSVDLTRTSASPS 496
F K PS P+L+ D T A P+
Sbjct: 415 FKKQPSYPVLTSDFEITDAGPN 436
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 233 YLYKLHCYTLSIYSLLLTHSR 171
+LY+LH +T +YSL H++
Sbjct: 207 FLYELHGHTSFVYSLTYIHNQ 227
>SPBC11B10.07c |||CDC50 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 LFA*IGRQMLIRERHFLFLLLIYVDCHIVGDK 105
+FA +G M + R L + Y DC +GD+
Sbjct: 50 VFAPLGAGMFVASRRVKELRIDYTDCMNIGDE 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,893
Number of Sequences: 5004
Number of extensions: 52049
Number of successful extensions: 151
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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