Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l24
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical pr... 31 0.55
DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isofor... 31 0.55
DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isofor... 31 0.55
AC006722-16|AAK68409.2| 308|Caenorhabditis elegans Hypothetical... 29 2.9
AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm rece... 29 3.9
Z81050-8|CAB02859.1| 371|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF125952-10|AAD14693.2| 352|Caenorhabditis elegans Seven tm rec... 28 6.8
>Z80216-4|CAB02281.1| 395|Caenorhabditis elegans Hypothetical
protein F10G8.4 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.55
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 273 ELSIDSYEDTKAKSKTGCNSSVNIKTVLGNSNCMSSLFKK--KTVIFNEIILLCKR*NT* 446
E ++ YED A T V + V+ N NCMSS FKK T N I+ C
Sbjct: 203 EFNLPKYEDFMAFYNTMKEVGVPLLAVMKN-NCMSSFFKKYHHTPPTNAPIIQCSTGGAR 261
Query: 447 CNLYNNAISCMLRFSSNLAKLKFS 518
C ++ I ++ N K +S
Sbjct: 262 CGVF-IIIDILINLIDNRIKNSYS 284
>DQ907010-1|ABI83734.1| 405|Caenorhabditis elegans EAK-6B isoform
protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.55
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 273 ELSIDSYEDTKAKSKTGCNSSVNIKTVLGNSNCMSSLFKK--KTVIFNEIILLCKR*NT* 446
E ++ YED A T V + V+ N NCMSS FKK T N I+ C
Sbjct: 196 EFNLPKYEDFMAFYNTMKEVGVPLLAVMKN-NCMSSFFKKYHHTPPTNAPIIQCSTGGAR 254
Query: 447 CNLYNNAISCMLRFSSNLAKLKFS 518
C ++ I ++ N K +S
Sbjct: 255 CGVF-IIIDILINLIDNRIKNSYS 277
>DQ907009-1|ABI83733.1| 388|Caenorhabditis elegans EAK-6A isoform
protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.55
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 273 ELSIDSYEDTKAKSKTGCNSSVNIKTVLGNSNCMSSLFKK--KTVIFNEIILLCKR*NT* 446
E ++ YED A T V + V+ N NCMSS FKK T N I+ C
Sbjct: 196 EFNLPKYEDFMAFYNTMKEVGVPLLAVMKN-NCMSSFFKKYHHTPPTNAPIIQCSTGGAR 254
Query: 447 CNLYNNAISCMLRFSSNLAKLKFS 518
C ++ I ++ N K +S
Sbjct: 255 CGVF-IIIDILINLIDNRIKNSYS 277
>AC006722-16|AAK68409.2| 308|Caenorhabditis elegans Hypothetical
protein Y19D10A.1 protein.
Length = 308
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/84 (22%), Positives = 41/84 (48%)
Frame = -1
Query: 517 ENFSFAKFDEKRNMQLIALLYKLHYVFYLLHNNMISLKITVFFLNNEDMQLLFPKTVLML 338
++ S KF + L+AL+ + L+H + ++ +T+F N+ ++ + L
Sbjct: 219 QSTSCDKFKSIQQQLLLALILQTSIPVLLMHISATAIYLTIFLGNSNEIIGETIGLTIAL 278
Query: 337 TLLLHPVFDFALVSSYESMLNSGL 266
L+P+ +V +Y ++L S L
Sbjct: 279 YPALNPIPTILIVKNYRTVLISEL 302
>AF022978-9|AAG24185.1| 353|Caenorhabditis elegans Seven tm
receptor protein 256 protein.
Length = 353
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 460 LYKLHYVF-YLLHNNMISLKITVFFLNNEDMQLLFPK-TVLMLTLLLHPVFDFAL 302
L++L Y F Y L + K + FFL + LFPK V +L LL F F++
Sbjct: 47 LFELAYAFLYFLEKPKLLTKESAFFLIVNWKESLFPKFVVCVLDLLFVGCFGFSI 101
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = -1
Query: 499 KFDEKRNMQLIALLYKLHYVFYLLHNNMISLKITVFFLNNEDMQLLFPKTVLMLTLLLHP 320
KF + IALL++ +L+H ++ +T+F N++++ + L L+P
Sbjct: 243 KFKTIQKQLFIALLFQTAIPVFLMHLPATAIYVTIFLGNSKEIIGEIISLTIALYPALNP 302
Query: 319 VFDFALVSSYESML 278
+ +V +Y +
Sbjct: 303 IPTLFVVKNYRKAI 316
>Z81050-8|CAB02859.1| 371|Caenorhabditis elegans Hypothetical
protein C50B6.10 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = -1
Query: 535 IICGFDENFSFAKFDEK---RNMQLIALLYKLHYVFYLLHNNMISLKITVFFLNNE-DMQ 368
I CG +F A+ E+ N ++ L+K V + I + + FL D+Q
Sbjct: 218 IFCGVRMHFKMAEKMEQFSITNRKMHKQLFKTLVVQITVPTFTIFMPVMFMFLIPFFDLQ 277
Query: 367 LLFPKTVLMLTLLLHPVFDFALVSSYES 284
L P VL+ L L+P D +V S S
Sbjct: 278 LGIPTGVLLCALSLYPFIDGLIVISIVS 305
>AF125952-10|AAD14693.2| 352|Caenorhabditis elegans Seven tm
receptor protein 257 protein.
Length = 352
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/80 (21%), Positives = 39/80 (48%)
Frame = -1
Query: 517 ENFSFAKFDEKRNMQLIALLYKLHYVFYLLHNNMISLKITVFFLNNEDMQLLFPKTVLML 338
++ S KF + L+AL+ + L+H + ++ +T+F N+ ++ + L
Sbjct: 237 QSTSCDKFKSIQQQLLLALILQTSIPVLLMHISATAIYLTIFLGNSNEIIGETIGLTIAL 296
Query: 337 TLLLHPVFDFALVSSYESML 278
L+P+ +V +Y ++L
Sbjct: 297 YPALNPIPTILIVKNYRTVL 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,882,820
Number of Sequences: 27780
Number of extensions: 278164
Number of successful extensions: 737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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