Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l19
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 32 0.44
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 32 0.44
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 32 0.44
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 32 0.44
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 32 0.44
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 32 0.44
Z81054-3|CAC70083.1| 190|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical p... 28 5.4
Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical p... 28 5.4
Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 5.4
Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical p... 27 9.5
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +3
Query: 513 GCYSERPAPRHHSRHGCLHHLTESEEAVLSYCQNTQL-GIGP--PPAPAH---SPLH 665
GC+ +R H H CL L ESE V+ Y Q G+ P PP H P+H
Sbjct: 100 GCFGKRTGQNHRRTHNCL-LLQESEMIVIDYPTEPQSNGMSPRTPPRGIHHSGEPVH 155
>Z81054-3|CAC70083.1| 190|Caenorhabditis elegans Hypothetical
protein F01D4.5b protein.
Length = 190
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 426 LWLHSIRYLWTPTIHLHCKQ 367
LW H LW P +HLH Q
Sbjct: 114 LWFHGSCVLWAPNVHLHGNQ 133
>Z81054-2|CAB02880.3| 223|Caenorhabditis elegans Hypothetical
protein F01D4.5a protein.
Length = 223
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -1
Query: 426 LWLHSIRYLWTPTIHLHCKQ 367
LW H LW P +HLH Q
Sbjct: 155 LWFHGSCVLWAPNVHLHGNQ 174
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 456 NNTELHLDRFLWLHSIRYLWTPTIHLHCKQPRTGTRPV 343
N + HL + H+ R L TP I +PR T P+
Sbjct: 1684 NAIQAHLQKLAAYHAFRCLPTPAISRFLPRPRQNTEPL 1721
>Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 405 YLWTPTIH---LHCKQPRTGTRPVENTR*N*SQPWLRQLPLVVSNKHYAITITMVVPLHR 235
YL T +H L+C P+T V + R R +V + K Y TM +P H
Sbjct: 275 YLGTINVHYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLFGGTMPLPCHP 334
Query: 234 ASSVN 220
S+ N
Sbjct: 335 LSTTN 339
>Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 405 YLWTPTIH---LHCKQPRTGTRPVENTR*N*SQPWLRQLPLVVSNKHYAITITMVVPLHR 235
YL T +H L+C P+T V + R R +V + K Y TM +P H
Sbjct: 281 YLGTINVHYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLFGGTMPLPCHP 340
Query: 234 ASSVN 220
S+ N
Sbjct: 341 LSTTN 345
>Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 405 YLWTPTIH---LHCKQPRTGTRPVENTR*N*SQPWLRQLPLVVSNKHYAITITMVVPLHR 235
YL T +H L+C P+T V + R R +V + K Y TM +P H
Sbjct: 275 YLGTINVHYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLFGGTMPLPCHP 334
Query: 234 ASSVN 220
S+ N
Sbjct: 335 LSTTN 339
>Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 405 YLWTPTIH---LHCKQPRTGTRPVENTR*N*SQPWLRQLPLVVSNKHYAITITMVVPLHR 235
YL T +H L+C P+T V + R R +V + K Y TM +P H
Sbjct: 281 YLGTINVHYNELYCFDPKTSMWSVISVRGTYPSARRRHCSVVSNGKVYLFGGTMPLPCHP 340
Query: 234 ASSVN 220
S+ N
Sbjct: 341 LSTTN 345
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 456 NNTELHLDRFLWLHSIRYLWTPTIHLHCKQPRTGTRPV 343
N + HL + H+ R L TP I +PR T P+
Sbjct: 1684 NAIQAHLQKLAAYHAFRCLPTPAISRFLPRPRQNTEPL 1721
>Z70311-1|CAA94376.2| 420|Caenorhabditis elegans Hypothetical
protein T25B9.1 protein.
Length = 420
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 552 RHGCLHHLTESEEAVLSYCQNTQLGIGPPP 641
R G L +T S++ V+++C N LG+ P
Sbjct: 55 RQGVLVKVTGSDKPVINFCANNYLGLSSHP 84
>Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical
protein B0035.11 protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +3
Query: 381 DGSSESTDIGLNEAKETDRDGVRCYCNTAQCVSTGYMCRSPRGGGCYSERPAPRHHSRHG 560
D ++ +I E + + +R + Q V + R PR G YS+ SR G
Sbjct: 317 DDVGQNPEITRRENARKEEESLRAHIRRTQMVRNNFKVRGPRYAGQYSDDEDMPTSSRKG 376
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 442 PSRSVSLASFNPISVDSDDPSSL*AAENW 356
P+ +V S NP+++D D+PS + A W
Sbjct: 715 PTATVVATSGNPLTLDFDNPSKIVVAPIW 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,562,345
Number of Sequences: 27780
Number of extensions: 403311
Number of successful extensions: 1063
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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