Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l14
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 42 3e-04
08_01_0027 - 195321-195932,197206-197415 37 0.016
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 36 0.021
08_02_1308 - 26024491-26025405 33 0.15
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 32 0.35
08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579 32 0.35
08_02_1251 - 25592537-25593380,25593589-25593893 32 0.46
10_08_0120 + 14972010-14973197 31 0.61
10_08_0094 + 14757470-14757808,14757826-14758563 31 0.61
11_01_0123 - 970411-970668,970710-970934 31 1.1
07_01_0331 + 2343570-2344064 31 1.1
08_01_0657 + 5674907-5674993,5675615-5676583 30 1.9
07_01_0329 - 2318000-2318473 30 1.9
02_04_0289 + 21615745-21616155,21617417-21617870,21618162-216182... 30 1.9
07_01_1036 + 9021395-9021658,9024214-9024690 29 2.4
02_02_0609 + 12105616-12106336,12106514-12106646,12107849-121080... 29 2.4
10_08_0130 - 15032348-15033338,15033459-15033517 29 3.2
09_02_0187 - 5533728-5534225 29 3.2
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 29 3.2
01_01_1121 + 8893177-8893199,8893260-8893287,8893656-8893730,889... 29 3.2
08_02_0623 - 19429029-19430207 29 4.3
06_01_0096 - 794148-794246,795682-796975,798960-799417 29 4.3
11_06_0416 + 23307984-23308281,23310083-23310900 28 5.6
09_02_0185 - 5500208-5500711 28 5.6
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 28 5.6
11_06_0465 + 23900454-23901530 28 7.5
11_06_0463 + 23879587-23879771,23879783-23881658 28 7.5
08_02_0626 - 19443797-19443917,19444136-19444761 28 7.5
08_02_0477 + 17618033-17618542 28 7.5
07_03_0526 - 19046900-19047083,19049061-19049464 28 7.5
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 28 7.5
03_06_0373 + 33468711-33468917,33469020-33469217 27 9.9
03_06_0370 + 33431696-33432217,33432521-33432796,33433003-334331... 27 9.9
03_06_0369 + 33425251-33425778,33425864-33426051,33426152-334262... 27 9.9
03_06_0026 - 31118997-31119113,31119700-31119900,31120032-311202... 27 9.9
01_01_0324 - 2613396-2613452,2613658-2613750,2614045-2614236,261... 27 9.9
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 42.3 bits (95), Expect = 3e-04
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = +3
Query: 255 AMQALHRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLIS 434
A+ +L R+ + +L D + A DG S HRAIL++ SP F ++F+ L +E S V IS
Sbjct: 172 ALSSLARMLQEGILTDITINATDG-SIMAHRAILASRSPVFRSMFSHDLKEKELSTVDIS 230
Query: 435 GVRSXXXXXXXXXXXXXXIDVTDTNVHE--LLMTADYLAFLGVLQLCCDHLRSSLNPKNC 608
+ S + + H LL AD + + C + L ++ KN
Sbjct: 231 DM-SLEACQAFLNYIYGDLRSEEFLTHRLALLRAADKYDISDLKEACHESLLEDIDTKNV 289
Query: 609 LGIMTFARRVFCYKL 653
L + A KL
Sbjct: 290 LERLQMAHLYRLQKL 304
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 246 SVAAMQALHRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLALFTTTLHSREQSDV 425
S +++ L R+ + D + DG H+AIL++CSP F ++F L +E S +
Sbjct: 91 SKSSLGCLSRMLTESIHADVTINTTDGV-LKAHKAILASCSPVFESMFLHDLKEKESSTI 149
Query: 426 LIS 434
I+
Sbjct: 150 NIN 152
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/95 (25%), Positives = 37/95 (38%)
Frame = +3
Query: 321 DGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGVRSXXXXXXXXXXXXXXIDVT 500
+G F HR L A S F A+F ++ D+ I +R ++VT
Sbjct: 593 EGKRFYAHRIALLASSDAFRAMFDGGYREKDARDIEIPNIRWNVFELMMRFIYTGSVEVT 652
Query: 501 DTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKN 605
+LL AD G+ +LC + +N N
Sbjct: 653 SDISQDLLRAADQYLLEGLKRLCEYTIAQDVNVDN 687
>08_02_1308 - 26024491-26025405
Length = 304
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 321 DGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGV 440
DG +FP HRA+L+A SP F A ++ + S + + +
Sbjct: 135 DGETFPAHRAVLAARSPVFRAELLGSMAESKMSSITLHDI 174
>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
Length = 334
Score = 32.3 bits (70), Expect = 0.35
Identities = 45/190 (23%), Positives = 69/190 (36%), Gaps = 8/190 (4%)
Frame = +3
Query: 99 VCVATSYFRYAIFLKT*PILMMSFT*TRKEMENDPNNNQTAGRETG---RCMSVAAMQAL 269
+C A + F K+ + SFT R+ DP+ R R + Q L
Sbjct: 94 ICFADQLIKRDEFEKSDDLRDDSFTIRRRR--RDPHREDDGDRHRNLRHRASASDLNQKL 151
Query: 270 HRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLA-LFTTTLHSREQSDVLISGVRS 446
+L + D +V G +F HR +L+A SP F A LF S V I + +
Sbjct: 152 GKLLDTEKGAD-VVFGVGGETFAAHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEA 210
Query: 447 XXXXXXXXXXXXXXI----DVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKNCLG 614
+ + DT LL+ AD + +C D L + +
Sbjct: 211 QVFKALLRFMYTDSLPEMEEEEDTMCQHLLVAADRYNLERLKLICEDRLCKHVGVGTVVN 270
Query: 615 IMTFARRVFC 644
I+T A + C
Sbjct: 271 ILTLAGQHHC 280
>08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579
Length = 458
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 321 DGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGV 440
DG +FP HRA+L+A SP F A ++ + S + + +
Sbjct: 281 DGETFPAHRAVLAARSPVFRAELLGSMAEAKMSCITLHDI 320
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 264 ALHRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGVR 443
A+H R L + G +F HRA+L+ CSP F AL ++ + ++ ++
Sbjct: 212 AIHMCRVDHLNGSDVFFFVGGETFHAHRALLAVCSPVFKALLLSSTAEAAACSITLNDIK 271
>10_08_0120 + 14972010-14973197
Length = 395
Score = 31.5 bits (68), Expect = 0.61
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Frame = +3
Query: 324 GASFPVHRAILSACSPYFLA-LF-----TTTLHSREQSDVLISGVRSXXXXXXXXXXXXX 485
G +F HR +L+A SP F+ LF TT++ D+ R+
Sbjct: 207 GETFTAHRLVLAARSPVFMVELFGPMKEGTTVNKIHIFDMEAQVFRALLKFIYTDMLPEM 266
Query: 486 XIDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKNCLGIMTFARRVFCYKL 653
+ V LL+ AD + +C + L + ++ + I+ A + +CY L
Sbjct: 267 DQEDETAMVQHLLVAADKYGLHRLKMICVEILSNHIDAYSVATILVLAEKHYCYGL 322
>10_08_0094 + 14757470-14757808,14757826-14758563
Length = 358
Score = 31.5 bits (68), Expect = 0.61
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 6/113 (5%)
Frame = +3
Query: 324 GASFPVHRAILSACSPYFLA-LFTTTLHSREQSDVLISGVRSXXXXXXXXXXXXXXIDVT 500
G +F HR +L+A SP F A LF + S V I + + + T
Sbjct: 197 GETFAAHRCVLAARSPVFSAELFGSMKESDAAGVVRIDDMEAQVFKALLRFVYTDSLPET 256
Query: 501 -----DTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKNCLGIMTFARRVFC 644
DT LL+ AD A + +C D L ++ I+T A + C
Sbjct: 257 EEEEQDTMAQHLLVAADRYAMERLKLICEDMLCKYIDVGTVTTILTLAEQHHC 309
>11_01_0123 - 970411-970668,970710-970934
Length = 160
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 180 RKEMENDPNNNQTAGRETGRCMSVAAMQALHRLRECRLLCDAIVRADDGASFP 338
R++M N+ + G + V+ +QALHR R L +++ ++ +SFP
Sbjct: 107 RRKMGNNEKERKEDGEGANETVEVSGLQALHRARHPPL--HPLIQVEERSSFP 157
>07_01_0331 + 2343570-2344064
Length = 164
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 489 IDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKN 605
IDV +++LL+ ++++ +L LCC H + + K+
Sbjct: 95 IDVDKNMLYDLLLASNFMNIKSLLDLCCQHTANLIKGKS 133
>08_01_0657 + 5674907-5674993,5675615-5676583
Length = 351
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 324 GASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGV 440
G FP HRAIL++ SP F+A + + V I +
Sbjct: 193 GKCFPAHRAILASRSPVFMASLFGDMKEKSSRSVEIRDI 231
>07_01_0329 - 2318000-2318473
Length = 157
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 489 IDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKN 605
IDV ++ LL+ +++L +L LCC H + + K+
Sbjct: 89 IDVDKNMLYGLLLASNFLNIKSLLDLCCQHTANLIKGKS 127
>02_04_0289 +
21615745-21616155,21617417-21617870,21618162-21618217,
21618307-21618437,21618565-21618727
Length = 404
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 188 NGKRPK*QSDGGSGNRSVHVGGSDAGA 268
+G P QSD S NR+++VGG D A
Sbjct: 291 SGSSPPRQSDSDSTNRTIYVGGLDPNA 317
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/112 (23%), Positives = 40/112 (35%)
Frame = +3
Query: 300 DAIVRADDGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGVRSXXXXXXXXXXX 479
DA R D A P HR IL++ SP F A+ + + I V
Sbjct: 71 DAPARPDTPA-VPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMY 129
Query: 480 XXXIDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPKNCLGIMTFARR 635
+ + +LL+ A+ + C L S ++ N + FA R
Sbjct: 130 TAEALLDEQMASDLLVLAEKYEVKNLKAYCEKFLTSKVSNDNAITHYAFAHR 181
>02_02_0609 +
12105616-12106336,12106514-12106646,12107849-12108048,
12108184-12108635,12109018-12109323
Length = 603
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 197 RPK*QSDGGSGNRSVHVGGSDAGAPSTARVSSAMRR 304
R K ++DG SG+ +VGGS G T SS ++
Sbjct: 555 RRKRENDGSSGSNRKNVGGSSGGKKKTVGGSSGSKK 590
>10_08_0130 - 15032348-15033338,15033459-15033517
Length = 349
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Frame = +3
Query: 324 GASFPVHRAILSACSPYFLA-LFTTTLHSREQSDVLISGVRSXXXXXXXXXXXXXXIDVT 500
G +F HR +L+A SP F+ LF S + + I + + +
Sbjct: 165 GETFAAHRLVLAARSPVFMVELFGPMKESTTVNKIQIFDMEAQVFRVLLKFIYIDMLPEM 224
Query: 501 DTN-----VHELLMTADYLAFLGVLQLCCDHLRSSLNPKNCLGIMTFARRVFCYKL 653
D LL+ AD + +C + L + ++ + I+ A + CY L
Sbjct: 225 DQEDEAAMAQHLLVAADKYGLHRLKMICVEILSNHIDANSVATILVLADKHHCYGL 280
>09_02_0187 - 5533728-5534225
Length = 165
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 489 IDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPK 602
IDV +T + L++ A+YL +L L C H + K
Sbjct: 95 IDVDNTMLFNLILAANYLNVPSLLDLACQHTADLIKGK 132
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 191 GKRPK*QSDGGSGNRSVHVGGSDAGAPSTARVSSAMRR 304
GKRP DGG G V+ GG D + ++ RR
Sbjct: 96 GKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRR 133
>01_01_1121 +
8893177-8893199,8893260-8893287,8893656-8893730,
8894748-8894813,8894917-8894959,8895102-8895150,
8895899-8895992,8896078-8896130,8896921-8897005,
8897242-8897344,8897421-8897513,8897985-8898051,
8898309-8898375,8898463-8898516,8898632-8898766
Length = 344
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 238 GACRWQRCRRSIDCASVVCYATLLCALTMALPSPC 342
G C + C+ C + Y L+C +T+ L PC
Sbjct: 70 GQCPNKECKGKQGCICSISYDELMCRVTVELAIPC 104
>08_02_0623 - 19429029-19430207
Length = 392
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 252 AAMQALHRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLALF 389
A + L +L E + D V+ + + + VHRA+L+A SP F A F
Sbjct: 174 AICRHLEQLLESKKGSDLTVQVGE-SKYDVHRAVLAARSPVFRAQF 218
>06_01_0096 - 794148-794246,795682-796975,798960-799417
Length = 616
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +2
Query: 179 AQRNGKRPK*QSDGGSGNRSVHVGGSDAGAPSTARVSSAMRRYCAR*RWRFLPRAPCYTL 358
A+ PK +GG G GG + GA + + R +R P AP Y +
Sbjct: 28 AKEKAAVPKNGGNGGGGKNGGGNGGGNGGAGAQPGEETTREIQVVREAYRREPAAPAYVM 87
Query: 359 SLQP 370
+P
Sbjct: 88 PEEP 91
>11_06_0416 + 23307984-23308281,23310083-23310900
Length = 371
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 324 GASFPVHRAILSACSPYFLA-LFTTTLHSREQSDVLI 431
G +F HR +L+A SP F+A LF SR ++ I
Sbjct: 209 GETFAAHRCVLAARSPVFMAELFGPMAMSRHNNEETI 245
>09_02_0185 - 5500208-5500711
Length = 167
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 489 IDVTDTNVHELLMTADYLAFLGVLQLCCDHLRSSLNPK 602
IDV +T + L++ A+YL +L L C H + K
Sbjct: 97 IDVDNTMLFGLILAANYLNVPSLLDLACQHTADLIKGK 134
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 321 DGASFPVHRAILSACSPYFLALFTTTLHSREQSDVLISGVRS 446
DG FP H+ +L+A SP F A + + + I + +
Sbjct: 318 DGEVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITIEDMEA 359
>11_06_0465 + 23900454-23901530
Length = 358
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 324 GASFPVHRAILSACSPYFLA 383
G +FP HR +L+A SP F A
Sbjct: 200 GETFPAHRCVLAARSPVFRA 219
>11_06_0463 + 23879587-23879771,23879783-23881658
Length = 686
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 321 DGASFPVHRAILSACSPYFLALFTTTLHSR 410
DG +F HR IL+A SP F A ++ R
Sbjct: 520 DGEAFAAHRCILAARSPVFRAELFGSMRER 549
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 300 DAIVRADDGASFPVHRAILSACSPYFLA 383
D R G +F HR +L+A SP F A
Sbjct: 155 DVTFRVGGGETFAAHRCVLAARSPVFKA 182
>08_02_0626 - 19443797-19443917,19444136-19444761
Length = 248
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 267 LHRLRECRLLCDAIVRADDGASFPVHRAILSACSPYFLALF 389
L +L E + CD + + + + HR +LSA SP F A F
Sbjct: 158 LEQLLESKEGCDVTFQVER-SDYDAHRVVLSARSPVFRAQF 197
>08_02_0477 + 17618033-17618542
Length = 169
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 489 IDVTDTNVHELLMTADYLAFLGVLQLCCDH 578
+DV T V EL++ A++L +L L C H
Sbjct: 99 VDVDRTMVFELILAANFLNAQDLLDLTCQH 128
>07_03_0526 - 19046900-19047083,19049061-19049464
Length = 195
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -3
Query: 500 CDIDTAEVGVLNQQQ*YLRTHSGYQYVALLPRMKSCCEQC 381
C +D +E G N++ +THS V + + C+QC
Sbjct: 94 CGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQC 133
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 161 DVFYLNAQRNGKRPK*QSDGGSGNRSVHVGGSDAGAPSTA 280
+VFY R + GG+G + +GG+ A AP+ A
Sbjct: 87 NVFYWFQNRKSRSKNKLRSGGTGRAGLGLGGNRASAPAAA 126
>03_06_0373 + 33468711-33468917,33469020-33469217
Length = 134
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +2
Query: 215 DGGSGNRSVHVGGSDAGAP-STARVSSAMRRYCAR*RWRFLPRAPCYTLSLQPILPGTVH 391
DGG R V AP S RV R CA W F C + P L VH
Sbjct: 12 DGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVH 71
Query: 392 NNS 400
NS
Sbjct: 72 KNS 74
>03_06_0370 +
33431696-33432217,33432521-33432796,33433003-33433183,
33433253-33433455,33433545-33433732,33433844-33434105
Length = 543
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +2
Query: 215 DGGSGNRSVHVGGSDAGAP-STARVSSAMRRYCAR*RWRFLPRAPCYTLSLQPILPGTVH 391
DGG R V AP S RV R CA W F C + P L VH
Sbjct: 117 DGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVH 176
Query: 392 NNS 400
NS
Sbjct: 177 KNS 179
>03_06_0369 +
33425251-33425778,33425864-33426051,33426152-33426251,
33426366-33426578,33426616-33426822,33426908-33427095,
33427234-33427492
Length = 560
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +2
Query: 212 SDGGSGNRSVHVGGSDAG-AP-STARVSSAMRRYCAR*RWRFLPRAPCYTLSLQPILPGT 385
+DGG G V AP S RV R C W F R C + P L
Sbjct: 117 ADGGGGEWRVFDDSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPA 176
Query: 386 VHNNS 400
VH NS
Sbjct: 177 VHKNS 181
>03_06_0026 -
31118997-31119113,31119700-31119900,31120032-31120218,
31120339-31120415,31120738-31120815,31120858-31120974,
31121047-31121175,31121327-31121479,31121589-31122044,
31122122-31122239,31122385-31122575,31123140-31123415,
31123524-31123700,31124040-31124141,31124227-31124459,
31125563-31125764
Length = 937
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 218 GGSGNRSVHVGGSDAGAPSTARVSSAMR 301
GG G +HVGG+ G + AR A+R
Sbjct: 24 GGGGGGGLHVGGARGGGAAPARRRLAVR 51
>01_01_0324 -
2613396-2613452,2613658-2613750,2614045-2614236,
2614325-2614398,2615846-2616098,2616179-2616249,
2616878-2617042,2617440-2617469,2617867-2617947,
2618047-2618272
Length = 413
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 173 LNAQRNGKRPK*QSDGGSGNRSVHVGGSDAGAPSTARVSSAM 298
++ +R G + S GG G++ VH G S+ G + A+ S +
Sbjct: 63 VHKRRRGLAVENASRGGGGDKVVHEGSSEQGCSAKAKEISGI 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,641,618
Number of Sequences: 37544
Number of extensions: 362773
Number of successful extensions: 1215
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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