Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l09
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 58 9e-10
SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 58 2e-09
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 48 1e-06
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 48 1e-06
SPAPB24D3.08c |||NADP-dependent oxidoreductase |Schizosaccharomy... 36 0.007
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 31 0.12
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 30 0.36
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 29 0.48
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 28 1.5
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 28 1.5
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 28 1.5
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 1.9
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 2.6
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 5.9
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 25 7.8
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 25 7.8
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 58.4 bits (135), Expect = 9e-10
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Frame = +2
Query: 248 AIAVNPIDAKQRAPKPNVETTPRILGWDGAGVVVAKGQ---SAKTFNI-GDEVFFTGDHR 415
A A+NP D PRI+G D AG V++ + F G E+ FT D
Sbjct: 44 AAAINPSDLMNATGGFPYTVYPRIVGRDYAGTVISGASHLVGTRVFGTSGSELSFTKD-- 101
Query: 416 RNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTL-LI 592
G++A+Y + E P L+F +AA++ + TAY L + KG + L+
Sbjct: 102 --GTHAEYCIIPEKAAVRMPSNLSFTEAASVGVPFTTAY-----LALSRGETKGSDIVLV 154
Query: 593 INSAGGVGSVASQMAKNLGLKVIGTASR 676
+ + G VGS Q+A++ G KVI T SR
Sbjct: 155 VGALGAVGSAVCQIAEDWGCKVI-TVSR 181
>SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone
oxidoreductase/ARE-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 329
Score = 57.6 bits (133), Expect = 2e-09
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKT-FNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLT 487
P I G + AGVV A G + F +GD V + G+ AQY + LV +K+
Sbjct: 58 PYIPGKEAAGVVAAVGDKVEADFKVGDRVVYLTPF---GAYAQYTNVPTTLVSKVSEKIP 114
Query: 488 FEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGT 667
+ A+A L +TAY I + + + D T+++ +AGGVG + QM + + VI T
Sbjct: 115 LKIASAALLQGLTAYTLIEEAYPVKTGD---TVVVHAAAGGVGLLLCQMLRARNVHVIAT 171
Query: 668 AS 673
AS
Sbjct: 172 AS 173
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 48.4 bits (110), Expect = 1e-06
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV---FFTG----------DHR-----RNGSNAQ 436
P + G DGAG++ G+ + F GD V FFT H R+G +
Sbjct: 61 PVVPGSDGAGIIEKVGEDVEGFEKGDSVVCNFFTNYLDGTPTDFATHSALGGTRDGCFQK 120
Query: 437 YVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVG 616
Y L + PK L+FE+ A +P +VTA+ ++ K G +L++ + GGV
Sbjct: 121 YAVLPAHALVHAPKNLSFEEIATLPCAAVTAWNGLFGSKEHQVK-PGNNVLVLGT-GGVS 178
Query: 617 SVASQMAKNLGLKVIGTASRPE 682
+ A Q A G V T+S E
Sbjct: 179 TFALQFALAAGANVTVTSSSDE 200
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 48.0 bits (109), Expect = 1e-06
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = +2
Query: 251 IAVNPIDAKQRAPKPNVETTPRILGWDGAGVVVAKGQSA-KTFNIGDEVFFTGDHRRNGS 427
+A NPID K + T + G D VV G+ ++ IG V +GS
Sbjct: 35 VAFNPIDWKTLYNASIEKGT--VGGTDFVAVVEDVGEGVDRSKYIGATVSGWAPGPLDGS 92
Query: 428 NA---QYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLI------SSKDKG- 577
NA +Y+ LD LV PK +T QAA +PLT TA + + L + SK+
Sbjct: 93 NAAWREYITLDVNLVYFVPKNITPSQAATLPLTFTTASQGLNQYLGLPLPPTDGSKNSAQ 152
Query: 578 -RTLLIINSAGGVGSVASQMAKNLGLKVIGTAS 673
+ +L+ + + VG Q+A + G KVI T S
Sbjct: 153 QKWVLVWSGSSSVGQYVVQLAHHAGYKVIATCS 185
>SPAPB24D3.08c |||NADP-dependent oxidoreductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 35.5 bits (78), Expect = 0.007
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 557 ISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPE 682
I G T+ I ++G VG +A Q+AK +GL V+G+ E
Sbjct: 155 IGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDE 196
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 31.5 bits (68), Expect = 0.12
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 572 KGRTLLIINSAGGVGSVASQMAKNLGLKVIG 664
+GR +LI +AGG+G V +M LG +V G
Sbjct: 4 EGRVVLITGAAGGIGKVLCKMFTELGDRVAG 34
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV 394
P ILG +GAG+V + G T +GD V
Sbjct: 67 PVILGHEGAGIVESVGPQVTTVQVGDPV 94
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 29.5 bits (63), Expect = 0.48
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 443 ALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSV 622
+L E L +P+ F+QA +PL++ + I +S + + L NS+G SV
Sbjct: 223 SLQESLHSVEPESPIFQQAPQIPLSNASQQSYINHSSDGASLPQS-SFLNFNSSGKRVSV 281
Query: 623 --ASQMAKNLGLKVIGTASRPE 682
A+Q KNL L + AS P+
Sbjct: 282 SAAAQQHKNLFLPYLPQASLPK 303
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 317 ILGWDGAGVVVAKGQSAKTFNIGDEVFFTGD 409
ILG + G+V KG IGD V D
Sbjct: 94 ILGHESCGIVAEKGDEVNNLEIGDRVVIAFD 124
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV 394
P ILG + AGVVV G+ + GD V
Sbjct: 62 PMILGHESAGVVVEVGKGVSSLKPGDPV 89
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV 394
P I G +GAGVVV G IGD V
Sbjct: 64 PLIGGHEGAGVVVKVGAGVTRLKIGDRV 91
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 266 IDAKQRAPKPNVETTPRILGWDGAGVVVAK 355
++ + APKP V++TPR + G+ K
Sbjct: 704 VNLTEEAPKPEVDSTPRFPSFTSNGITTDK 733
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 254 AVNPIDAKQRAPKPNVETTPRILGWDGAGVVV 349
++N DA++++PKPNV I GA V +
Sbjct: 1012 SLNKEDAEEKSPKPNVVNVTSITKTAGASVEI 1043
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 468 VPTKTSSKATYCAFEPFRL*SP-VKNTSSPILNVLALWPLATTTPAPSHP 322
VP+ S ++ A R P VKNT +P ++ A P AT+T HP
Sbjct: 503 VPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATSTANRRHP 552
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV 394
P +LG +GAG+V + G+ GD V
Sbjct: 64 PIVLGHEGAGIVESIGEGVINVRPGDHV 91
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 25.4 bits (53), Expect = 7.8
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 449 DEVLVG--TKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLI 592
D + +G T P L + AM T T EC+YD + KDKG L I
Sbjct: 338 DPIYLGKCTGPTSLCWAGGYAMESTCHTGQECLYDVV----KDKGWHLSI 383
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,533,461
Number of Sequences: 5004
Number of extensions: 46201
Number of successful extensions: 131
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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