Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l09
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 100 9e-22
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 69 4e-12
03_01_0012 - 101584-101898,102274-102531,102932-103474 57 1e-08
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 52 4e-07
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 52 6e-07
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 52 6e-07
09_04_0643 + 19176561-19176644,19176761-19176902,19178084-191781... 50 1e-06
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 50 2e-06
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 49 4e-06
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 46 3e-05
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 33 0.16
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 33 0.28
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 33 0.28
10_08_0178 - 15475614-15475850,15476716-15476808 32 0.49
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 31 0.86
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 31 1.1
01_01_0583 - 4321992-4322165,4322261-4322353,4322445-4322828,432... 30 2.0
06_03_0417 + 20576716-20576742,20578110-20578345,20578347-205786... 29 2.6
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 29 3.5
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 28 6.1
03_05_1127 + 30587488-30588291 28 6.1
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 28 8.0
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 28 8.0
06_03_0204 + 17869426-17869554,17870105-17870338 28 8.0
02_05_1157 - 34533625-34533875,34535279-34536340,34536673-345368... 28 8.0
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 100 bits (240), Expect = 9e-22
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 10/157 (6%)
Frame = +2
Query: 248 AIAVNPIDAKQRAPKPNVETTP--RILGWDGAGVVVAKGQSAKTFNIGDEVFFTGDHR-- 415
A A+NP+DAK+RA K +P + G+D AGVVV G+ K GDEV+ +
Sbjct: 118 AAALNPVDAKRRAGKFKATDSPLPTVPGYDVAGVVVKAGRKVKGLKEGDEVYGNISEKAL 177
Query: 416 ----RNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRT 583
++GS A+Y A++E L+ KPK L F QAA +PL TA+E + +R S+ G++
Sbjct: 178 EGPKQSGSLAEYTAVEEKLLALKPKSLGFAQAAGLPLAIETAHEGL-ERAGFSA---GKS 233
Query: 584 LLIINSAGGVGSVASQMAKNL--GLKVIGTASRPETQ 688
+LI+ AGGVGS+A Q+AK++ KV TAS P+ +
Sbjct: 234 ILILGGAGGVGSLAIQLAKHVYGASKVAATASTPKLE 270
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 68.9 bits (161), Expect = 4e-12
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Frame = +2
Query: 248 AIAVNPIDAKQRAPKPNV---ETTPRILGWDGAGVVVAKGQSAKTFNIGDEVF-FTGDHR 415
A+++NP+D + R+ P I+G D +G V A G S +F IG EVF
Sbjct: 66 AVSINPLDLRMRSGYGRSIFEPVLPLIIGRDISGEVAATGTSVSSFTIGQEVFGALHPTA 125
Query: 416 RNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLII 595
G+ Y L + + +KP L+ +A+A+P ++TA+ ++ IS +G+ +L+I
Sbjct: 126 IRGTYTDYAILSQDELTSKPSTLSHVEASAIPFAALTAWRALHGTARIS---EGQRVLVI 182
Query: 596 NSAGGVGSVASQMAKNLGLKVIGT 667
G VG A Q+A G V T
Sbjct: 183 GGGGAVGLAAVQLAVAAGCSVSAT 206
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 57.2 bits (132), Expect = 1e-08
Identities = 48/145 (33%), Positives = 66/145 (45%)
Frame = +2
Query: 248 AIAVNPIDAKQRAPKPNVETTPRILGWDGAGVVVAKGQSAKTFNIGDEVFFTGDHRRNGS 427
AI VN ID R + P + G + GVV A G +GD V + G+ GS
Sbjct: 82 AIGVNFIDVYYRQGVYSAPL-PFVPGREAVGVVTAVGPGLTGRKVGDVVAYAGNPM--GS 138
Query: 428 NAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAG 607
AQ + + P + AAA+ L +TA+ + + S D +L+ +AG
Sbjct: 139 YAQEQIIPASVAVPLPPSIDHNTAAAIMLKGMTAHVLLRRVYKVQSGD---CVLVHAAAG 195
Query: 608 GVGSVASQMAKNLGLKVIGTASRPE 682
GVGS+ Q A LG VIGT S E
Sbjct: 196 GVGSLLCQWANALGATVIGTVSNEE 220
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 52.0 bits (119), Expect = 4e-07
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 3/175 (1%)
Frame = +2
Query: 125 PKTMRAVGLYKYLPIADVNSLIDLEVNLPXXXXXXXXXXXXAIAVNPID--AKQRAPKPN 298
P TMRAV Y +L +E+ +P A ++N D ++ +P
Sbjct: 7 PATMRAVQYGGYG--GGAATLKFVEIPVPSLKKNEILIKIEAASLNQADWRIQKGLMRPF 64
Query: 299 VETTPRILGWDGAGVVVAKGQSAKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPK 478
P I D +G V+ G + F +GD+V + + G A+YVA E ++P
Sbjct: 65 HPKFPFIPVTDVSGEVIEVGSAIHEFKVGDKVVSKLNLWKAGGLAEYVAASESDTVSRPA 124
Query: 479 KLTFEQAAAMPLTSVTAYECIYD-RLLISSKDKGRTLLIINSAGGVGSVASQMAK 640
++ AA +P+ +TA + + G +LI ++ GVG+ A Q+AK
Sbjct: 125 GISAADAAGLPVAGLTALQALSSIGTKFDGSGTGADVLITAASSGVGTYAVQLAK 179
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 51.6 bits (118), Expect = 6e-07
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Frame = +2
Query: 131 TMRAVGLYKYLPIADVNSLIDLEVNLPXXXXXXXXXXXXAIAVNPIDAK-QRAP-KPNVE 304
TMRAV Y A+ L +EV +P A ++NPID K Q+ +P +
Sbjct: 13 TMRAVQYDGYGGGAE--GLKHVEVPIPSPKKGEVLIKMEAASINPIDWKIQKGMLRPFLP 70
Query: 305 TT-PRILGWDGAGVVVAKGQSAKTFNIGDEVF---------FTGD--HRRNGSNAQYVAL 448
P I D AG V A G + F +GD+V F D + G A+Y
Sbjct: 71 WKFPSIPACDLAGKVAAVGGGVRRFELGDKVIAINFPLSSVFECDLSEQSGGGFAEYAVA 130
Query: 449 DEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDR-LLISSKDKGRTLLIINSAGGVGSVA 625
L +P +++ + A +PL +VTA + + + + +L+ ++GGVG A
Sbjct: 131 QASLTVERPPEVSAAEGACLPLAAVTALQALRAAGAGLDDAPPPKNVLVTAASGGVGHFA 190
Query: 626 SQMAKNLGLKVIGT 667
Q+A+ G +V T
Sbjct: 191 VQLARLGGHRVTAT 204
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 51.6 bits (118), Expect = 6e-07
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 9/189 (4%)
Frame = +2
Query: 128 KTMRAVGLYKYLPIADVNSLIDLEVNLPXXXXXXXXXXXXAIAVNPIDAK--QRAPKPNV 301
+ MRAV KY +L +EV +P A ++N +D K + +P +
Sbjct: 6 RRMRAVQYDKYG--GGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKGVARPFM 63
Query: 302 ETT-PRILGWDGAGVVVAKGQSAKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPK 478
P I +D AG VV G+ +F +GD+V + G A+Y +P
Sbjct: 64 PNKFPFIPVYDLAGEVVELGRGVSSFKVGDKVIAI-NFPGGGGLAEYAVAQASRTAPRPP 122
Query: 479 KLTFEQAAAMPLTSVTAYECIYDR-LLISSKDKG-----RTLLIINSAGGVGSVASQMAK 640
+++ A +P+ +VTA + + + + D G + +L+ ++GGVG A Q+A
Sbjct: 123 EVSAAVGACLPIAAVTALVALRTAGVSLDAGDGGGGGAKKNVLVTAASGGVGHFAVQLAS 182
Query: 641 NLGLKVIGT 667
G +V T
Sbjct: 183 AAGHRVTAT 191
>09_04_0643 +
19176561-19176644,19176761-19176902,19178084-19178172,
19178470-19179195
Length = 346
Score = 50.4 bits (115), Expect = 1e-06
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 11/194 (5%)
Frame = +2
Query: 119 ALPKTMRAVGLYKYLPIADVNSLIDLEVNLPXXXXXXXXXXXXAIAVNPIDAKQRAPKPN 298
A PKTMRAV KY L +EV +P A ++NPID K +
Sbjct: 7 AAPKTMRAVQYDKY--GGGPEGLKHVEVPIPAPKEGELLIKMEAASINPIDWKIQKGMLR 64
Query: 299 V---ETTPRILGWDGAGVVVAKGQSAKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGT 469
+ + P I D +G VV G F GD+V + G A+Y L
Sbjct: 65 LFLPKKFPFIPVGDLSGEVVELGGGVSGFKPGDKV-VSMSFPNCGGLAEYAVAPASLTVA 123
Query: 470 KPKKLTFEQAAAMPLTSVTAYECI------YDRLLISSKDKG--RTLLIINSAGGVGSVA 625
+P +++ A +P + +A + + +D ++ G + +L+ ++GGVG A
Sbjct: 124 RPPEVSAADGATLPAAAGSALQQLKAAGVRFDADADAAAAAGGPKNVLVTAASGGVGHYA 183
Query: 626 SQMAKNLGLKVIGT 667
Q+AK GL V T
Sbjct: 184 VQLAKLAGLHVTAT 197
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 49.6 bits (113), Expect = 2e-06
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Frame = +2
Query: 194 LEVNLPXXXXXXXXXXXXAIAVNPIDAK-QRAP-KPNV-ETTPRILGWDGAGVVVAKGQS 364
+EV +P A +NP+D K Q+ +P + P I D AGVV G
Sbjct: 30 VEVPVPSAKKNEVLLKLEAATINPVDWKIQKGMLRPLLPRRLPFIPVTDVAGVVAGVGPG 89
Query: 365 AKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIY 544
F +GD+V + G A+Y L + ++ + A +P+ + TA + +
Sbjct: 90 VNDFAVGDQVVAMLNSMNGGGLAEYAVAAANLTVKRTPNVSAAEGAGLPIAAGTALQALR 149
Query: 545 D-RLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGT 667
+ +L+ ++GGVG A Q+AK L V T
Sbjct: 150 SIGAKFDGTGEPLNVLVTAASGGVGLYAVQLAKLANLHVTAT 191
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 48.8 bits (111), Expect = 4e-06
Identities = 37/120 (30%), Positives = 53/120 (44%)
Frame = +2
Query: 323 GWDGAGVVVAKGQSAKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAA 502
G + GVV A G +GD V + G+ + + L P + AA
Sbjct: 113 GKEAVGVVSAVGPGVTGIEVGDVVGYADTPM--GTYTEEQIIPATLAIPIPPSVDHITAA 170
Query: 503 AMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPE 682
++ L +T Y + I + G T+L+ +AGGVGS+ Q A LG VIGT S E
Sbjct: 171 SVLLKGMTTYVLVKQAFKIQA---GHTVLVHAAAGGVGSLLCQWANALGATVIGTVSTQE 227
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 46.0 bits (104), Expect = 3e-05
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Frame = +2
Query: 191 DLEVNLPXXXXXXXXXXXXAIAVNPIDAKQRAPK-PNVETTPRILGWDGAGVVVAKGQSA 367
D+ LP A VN D QR + P G + +G ++A G +
Sbjct: 19 DVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYPAPPGASPYPGLECSGTILALGPNV 78
Query: 368 KT-FNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIY 544
+ + +GD+V +G A+ V + + P+ ++ AA +P + T + ++
Sbjct: 79 PSRWAVGDQVCAL---LSSGGYAEKVVVPAGQLLPVPEGVSLTDAAGLPEVACTVWSTVF 135
Query: 545 DRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTASRPE 682
+ S + LI + G+G+ A Q+AK+LG+KV TA E
Sbjct: 136 ---VTSHLSPSESFLIHGGSSGIGTFAIQIAKHLGIKVFVTAGSEE 178
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 500 AAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTA 670
+A+ + +TAY +Y+ + + G + + ++G VGS+ Q AK G V+G A
Sbjct: 133 SALGTSGMTAYAGLYE---VGRPEAGEKVFVSAASGSVGSLVGQFAKLAGCYVVGCA 186
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 32.7 bits (71), Expect = 0.28
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = +2
Query: 290 KPNVETTPRILGWDGAGVVVAKGQSAKTFNIGDEV--FFTGDHRRNGSNAQYVALDEVLV 463
K P G++ G+V + G S +G V G + S V +L
Sbjct: 347 KETAARLPLDAGFEAVGIVASVGDSVNHIKVGSPVALMIFGAY----SEFTQVPAKHLLP 402
Query: 464 GTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKN 643
+P + AM + +TA + ++S G+ +L+ +AGG G A Q+AK
Sbjct: 403 VPRPDP----EVVAMLTSGLTASIALEKAGQMAS---GQVVLVTAAAGGTGQFAVQLAKL 455
Query: 644 LGLKVIGT 667
G KV+ T
Sbjct: 456 AGNKVVAT 463
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 398 FTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKG 577
+T G A + +D+ V P L EQAA + +T Y + L+S +G
Sbjct: 125 YTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRG 184
Query: 578 RTLLIINSAGGVGSVASQMAKNLG--LKVIGTASR 676
L GGVG + ++AK++G + VI +++R
Sbjct: 185 GVL----GLGGVGHMGVKVAKSMGHHVTVISSSAR 215
>10_08_0178 - 15475614-15475850,15476716-15476808
Length = 109
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +2
Query: 275 KQRAPKPN---VETTPRILGWDGAGVVV 349
K AP PN V+T PR+LG DG+GV+V
Sbjct: 21 KVAAPPPNFPLVKTMPRLLGTDGSGVLV 48
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 269 DAKQRAPKPNVETTPRILGWDGAGVVVAKGQSAKTFNIGDEV 394
D Q + PRI G + +GVV + G+ F +GD V
Sbjct: 666 DVTQWQSTAQTDLFPRIFGHEASGVVESVGEGVTEFEVGDHV 707
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV--FFTGD 409
PRILG + AGVV + G+ + GD V FTG+
Sbjct: 82 PRILGHEAAGVVESVGEGVEDLAPGDHVVPIFTGE 116
>01_01_0583 -
4321992-4322165,4322261-4322353,4322445-4322828,
4322909-4322993,4323206-4323444,4323542-4323747,
4324052-4324163
Length = 430
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -2
Query: 388 ISYIECLSTLAFGDNDAGAVPSQDPR 311
+S+I+C+S ++FG A A PSQD +
Sbjct: 225 LSWIDCISNISFGALLAEAAPSQDSK 250
>06_03_0417 +
20576716-20576742,20578110-20578345,20578347-20578601,
20578731-20579298
Length = 361
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 482 LTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINS 601
+TFEQ VTAY D L+ S +D R LLII+S
Sbjct: 96 ITFEQTRPFTPGHVTAYAIFMDSLVTSPEDM-RLLLIISS 134
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +2
Query: 422 GSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECI-YDRLLISSKDKGRTLLIIN 598
G + V + E V P+ + + A + +T Y + Y L K G +
Sbjct: 139 GGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVG-----VL 193
Query: 599 SAGGVGSVASQMAKNLGLKVIGTASRP 679
GG+G VA + A+ GLKV +S P
Sbjct: 194 GLGGLGHVAVKFARAFGLKVTVISSSP 220
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 422 GSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINS 601
G A+Y + + P L + ++A + TAY + + + D + +
Sbjct: 192 GGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALRHAAEMRAGDS----VAVIG 247
Query: 602 AGGVGSVASQMAKNLG 649
GGVGS Q+AK G
Sbjct: 248 VGGVGSSCLQIAKAFG 263
>03_05_1127 + 30587488-30588291
Length = 267
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 575 GRTLLIINSAGGVGSVASQMAKNLGLKV 658
GR ++ AGG+GS S+ +LG +V
Sbjct: 12 GRVAIVTGGAGGIGSAVSRHLASLGARV 39
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEVF--FTGD 409
PRILG + G+V + G+ GD V FTG+
Sbjct: 64 PRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGE 98
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 341 VVVAKGQSAKTFNIGDEVFFTGDHRRNG-SNAQYVALDEVLVGTKPKKLTFEQAAAMPLT 517
VV GQSA + N G+E + RR G + + + L+ + VG + +L+ Q LT
Sbjct: 172 VVRQPGQSATSGNAGNEGTTSNPARRRGPTMTRSIVLEAINVG-QGSELSVAQVIPDSLT 230
Query: 518 SVTAY 532
+++ Y
Sbjct: 231 TISQY 235
>06_03_0204 + 17869426-17869554,17870105-17870338
Length = 120
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 88 LACNLLGGECRYQYKKDKHDHYNLKI 11
LACN G+ R+++K+D D + LK+
Sbjct: 81 LACNPNDGKARHEHKEDHGDEHWLKV 106
>02_05_1157 -
34533625-34533875,34535279-34536340,34536673-34536837,
34536993-34537941
Length = 808
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = -3
Query: 381 ILNVLALWPL--ATTTPAPSHPKILGVVST---FGFGARCFASIGF 259
+L V+AL P+ A+ P P P G +S FG GARC G+
Sbjct: 14 LLLVVALAPVRPASGQPLPGCPDRCGNISVPYPFGIGARCARDFGY 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,364,808
Number of Sequences: 37544
Number of extensions: 296684
Number of successful extensions: 919
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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