Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l09
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 72 3e-13
AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical ... 63 2e-10
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 29 0.020
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 2.4
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 7.2
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 7.2
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 72.1 bits (169), Expect = 3e-13
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = +2
Query: 194 LEVNLPXXXXXXXXXXXXAIAVNPIDAKQRAPK-PNVETTPRILGWDGAGVVVAKGQSAK 370
+E ++P A VNP+D RA + + P + G DGAG V G+S K
Sbjct: 27 VESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYVPGKDGAGFVELVGESVK 86
Query: 371 TFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDR 550
+GD V++ + S A+YVA++ P+ ++FE+ A++ + +TAY ++
Sbjct: 87 NVKVGDRVWYGSE---ADSTAEYVAVNRPF--ELPEGVSFEEGASLGVPYLTAYRALFH- 140
Query: 551 LLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKVIGTA 670
++ G +L+ ++GGVGS Q+A ++ +GTA
Sbjct: 141 --LAGAKTGDVILVHGASGGVGSALMQLAAWRNIEAVGTA 178
>AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical
protein F56H1.6 protein.
Length = 381
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTF 490
P I G D VV + G GDEV G++A++V D KP L+F
Sbjct: 87 PLIPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVVTDSKYCSKKPSNLSF 146
Query: 491 EQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGL-KVIGT 667
AAA+P + TAY + K + +LI AGGVGS+A Q+ K G K++ T
Sbjct: 147 VSAAALPYVASTAYSAFTIARVSQRNAKQQRVLIHGGAGGVGSMAIQLLKAWGCEKIVAT 206
Query: 668 ASR 676
++
Sbjct: 207 CAK 209
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 41.9 bits (94), Expect = 4e-04
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Frame = +2
Query: 299 VETTPRILGWDGAGVVVAKGQSAKTFNIGDEVFF--------------TGDH-------- 412
V P I G +GAG V++ G K + IGD+V TG
Sbjct: 61 VSKCPMIGGHEGAGSVISVGSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHVWN 120
Query: 413 ---RRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRT 583
++ G+ +Y + +V PK + AA + VTAY+ + + S G+
Sbjct: 121 IGVQKYGTFQEYATIRDVDAIKIPKSMNMAAAAPVLCGGVTAYKALKE----SEVKSGQI 176
Query: 584 LLIINSAGGVGSVASQMAKNLGLKVI 661
+ + + GG+GS A Q A+ +G++V+
Sbjct: 177 VAVTGAGGGLGSFAIQYARAMGMRVV 202
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.016
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 25/142 (17%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGD--------------EVFFTG-----DH------R 415
P I G +GAG VV G K +NIGD E TG DH
Sbjct: 65 PLIGGHEGAGTVVTIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHIQNYGID 124
Query: 416 RNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLII 595
R+G+ +Y+ + ++ AA + VTAY+ L ++ G+ +++
Sbjct: 125 RHGTFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAYK----SLKATNVKPGQIVVLT 180
Query: 596 NSAGGVGSVASQMAKNLGLKVI 661
+ GG+GS Q AK +G++V+
Sbjct: 181 GAGGGLGSFGIQYAKAMGMRVV 202
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 28.7 bits (61), Expect(2) = 0.020
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 311 PRILGWDGAGVVVAKGQSAKTFNIGDEV 394
P +LG + +GVV G K F +GD +
Sbjct: 61 PMVLGHESSGVVSEIGSEVKGFKVGDRI 88
Score = 26.6 bits (56), Expect(2) = 0.020
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 374 FNIGDEVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRL 553
+N+ ++ F NG+ +++V D P L+FE A + SV C +
Sbjct: 107 YNLCPDMRFFATPPVNGALSRFVVHDADFCFKLPDNLSFEDGALLEPLSVAIQACRRGTV 166
Query: 554 LISSKDKGRTLLIINSAGGVGSVASQMAKNLGL-KVIGT 667
+ K +++ AG +G + AK +G KV+ T
Sbjct: 167 QMGQK------ILVLGAGPIGVLNLLTAKAIGASKVVIT 199
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 389 EVFFTGDHRRNGSNAQYVALDEVLVGTKPKKLTFEQAAAMPLTSVTAYECIYDRLLISSK 568
EV T NG +Y+ L + + T P+K+TF++ + PLT + A D L
Sbjct: 255 EVTITPPDEMNGELDKYLVLIQAVNETIPRKMTFDKPTSTPLT-ICALSPSTDYALAIEA 313
Query: 569 DKG 577
D G
Sbjct: 314 DNG 316
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -3
Query: 465 PTKTSSKATYCAFEPFRL*SPVKNTS-SPILNVLALWPLATTTP---APSHPKILGVVST 298
PTK+ SK ++ PF +P KNT+ + L VL +T++P PS+P+ ST
Sbjct: 3288 PTKSGSKLSFFGLSPFGKVTPKKNTAQTQSLTVLE----STSSPELLTPSNPETSNTAST 3343
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 479 KLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKV 658
K+TF++AA +P+ +A+E SS +L +NS+ + S +S ++ +
Sbjct: 337 KMTFKKAANIPILKTSAFEQPSSPPPSSSVSSSISLSEVNSSTSIASESSPAKRSSNFDL 396
Query: 659 IGTASRPETQ 688
+ P Q
Sbjct: 397 TASNELPPPQ 406
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 479 KLTFEQAAAMPLTSVTAYECIYDRLLISSKDKGRTLLIINSAGGVGSVASQMAKNLGLKV 658
K+TF++AA +P+ +A+E SS +L +NS+ + S +S ++ +
Sbjct: 351 KMTFKKAANIPILKTSAFEQPSSPPPSSSVSSSISLSEVNSSTSIASESSPAKRSSNFDL 410
Query: 659 IGTASRPETQ 688
+ P Q
Sbjct: 411 TASNELPPPQ 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,932,273
Number of Sequences: 27780
Number of extensions: 255876
Number of successful extensions: 731
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -