Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11l08
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   6.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   6.8  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   6.8  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   6.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.8  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   9.0  

>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 107


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 326 FIALHASSASCKFSNSMKAKPGG 258
           F+A     A+C+FS   +A+ GG
Sbjct: 458 FLATVVEEAACRFSAVAQAQLGG 480


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 682 NPQYSLNFNTWKASDYDNTKPI 617
           N  Y+ N+N +  ++Y+N K +
Sbjct: 331 NNNYNNNYNNYNNNNYNNYKKL 352


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 340


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYD 632
           SKE   +  +  L+ N  Y+ N+N +   +Y+
Sbjct: 309 SKEPKIISNNNSLSNNYNYNNNYNNYNKHNYN 340


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 307 LPPPASSQIL*KRNLGDLVLPKLS 236
           L P  S  I  K+ + DLV+ KLS
Sbjct: 206 LQPVVSDPIFDKKAMSDLVICKLS 229


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 307 LPPPASSQIL*KRNLGDLVLPKLS 236
           L P  S  I  K+ + DLV+ KLS
Sbjct: 206 LQPVVSDPIFDKKAMSDLVICKLS 229


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 727 SKELHFLEPSKCLAINPQYSLNFNTWKASDYDNTKPI*PSN*IN 596
           SKE   +  +  L+ N  Y+ N+N +  +   N K +   N IN
Sbjct: 76  SKEPKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIIN 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,907
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 36
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)