Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11l03
(276 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.11 |||BolA domain protein|Schizosaccharomyces pombe|chr ... 31 0.040
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 0.37
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 27 0.49
SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 1.1
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 2.0
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 24 3.5
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 24 4.6
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 23 6.1
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 23 8.0
SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyc... 23 8.0
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 23 8.0
>SPAC8C9.11 |||BolA domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 80
Score = 30.7 bits (66), Expect = 0.040
Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +3
Query: 144 RLVNTLLQEELKTIHAFTQ-KTLT 212
RLVN LQE +K IHAFTQ +TL+
Sbjct: 52 RLVNHKLQEVIKDIHAFTQVRTLS 75
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.5 bits (58), Expect = 0.37
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAIA-SVILNNKDPL 40
+PI T++N+S I S + S AIA S ILN+ P+
Sbjct: 3430 TPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTPI 3468
Score = 25.0 bits (52), Expect = 2.0
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN S I S + S I +S ILN+ P+
Sbjct: 1210 TPITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPI 1248
Score = 25.0 bits (52), Expect = 2.0
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI ++LN+S I S + S I +S ILN+ P+
Sbjct: 3106 TPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPI 3144
Score = 24.6 bits (51), Expect = 2.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN S I S + S I +S +LN+ P+
Sbjct: 1522 TPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPI 1560
Score = 24.6 bits (51), Expect = 2.6
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI ++LN+S I S + S I +S +LN+ P+
Sbjct: 3166 TPITSSSVLNSSTAITSSSIVNSSTPITSSSVLNSSTPI 3204
Score = 24.6 bits (51), Expect = 2.6
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI ++LN+S I S + S I +S +LN+ P+
Sbjct: 3442 TPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPI 3480
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S ++N P+
Sbjct: 802 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 840
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S ++N P+
Sbjct: 1090 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 1128
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S ++N P+
Sbjct: 1390 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 1428
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S ++N P+
Sbjct: 2230 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 2268
Score = 24.2 bits (50), Expect = 3.5
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S ++N P+
Sbjct: 2518 TPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPI 2556
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S LN P+
Sbjct: 598 TPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPI 636
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI ++LN S I S + S AI +S LN P+
Sbjct: 994 TPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPI 1032
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S LN P+
Sbjct: 2818 TPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPI 2856
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 SPICERTILNASALIIWSLLCKSGLAI-ASVILNNKDPL 40
+PI T+LN+S I S + S I +S LN P+
Sbjct: 3046 TPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPI 3084
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 27.1 bits (57), Expect = 0.49
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 14 KTDLKR*KYNGSLLFKITDAIARPDLHNKDHIMRAEAFKIVL 139
K +K K G + K DA+ +LHN+ +M+ IVL
Sbjct: 897 KNQVKSVKIKGMTIIKAPDALKNANLHNEVIVMQTTDKPIVL 938
>SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 116
Score = 25.8 bits (54), Expect = 1.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 144 RLVNTLLQEELKTIHAFTQKTLTVD 218
RLVN++L+EE++ +H T D
Sbjct: 81 RLVNSILKEEIRNMHGLNLSTEVED 105
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.0 bits (52), Expect = 2.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 147 ICERTILNASALIIWSLLCKSGLAI 73
+C+ S LIIW L+C+ ++
Sbjct: 1567 LCDTKTYEESKLIIWKLICQKACSL 1591
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 24.2 bits (50), Expect = 3.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 114 GLKHLKSSFRRLVNTLLQEELKTIHAFTQKTLTVDQWKTQ*CILFNTMQ 260
GLK +F + Q++L T + T KT T+D +K + TMQ
Sbjct: 154 GLKISHDNFSDSNDFSFQKKLNTEDSNTSKTSTLDMYKEKLKPFTKTMQ 202
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 214 LISGRHNNVYYLIQCSSRKK 273
L+ HN +YY I+ +KK
Sbjct: 217 LVQSNHNRLYYAIKVLEKKK 236
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 126 LKSSFRRLVNTLLQEELKTIH 188
+KS F+RL++ L E ++ IH
Sbjct: 454 MKSLFQRLLSISLNENVRAIH 474
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 125 FKIVLSQIGEHIASRGTEDNPRVHP 199
FK +SQ E + + ED+ + HP
Sbjct: 43 FKTTISQNNEEVKTSLKEDSSKFHP 67
>SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 23.0 bits (47), Expect = 8.0
Identities = 8/28 (28%), Positives = 20/28 (71%)
Frame = +2
Query: 128 KIVLSQIGEHIASRGTEDNPRVHPENLN 211
K++++++ +HIA+R D+ +P+N +
Sbjct: 173 KLIINRL-DHIATRNITDSMEFNPKNFH 199
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 23.0 bits (47), Expect = 8.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 140 SQIGEHIASRGTEDNPRVHPEN 205
S+I I G E+NP V+P N
Sbjct: 853 SKIARLIFRVGNEENPLVYPNN 874
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,135,100
Number of Sequences: 5004
Number of extensions: 20398
Number of successful extensions: 69
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 61717020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -