Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k24
         (736 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0257 + 1898950-1899636                                           31   1.3  
11_01_0259 + 1981554-1982249                                           29   3.8  
01_03_0264 - 14419381-14419431,14419807-14419875,14420771-144208...    29   3.8  
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967...    29   5.1  
06_03_0934 - 26073084-26073220,26073296-26073345,26073465-260736...    28   6.7  
01_03_0022 + 11724319-11725381,11725476-11725582                       28   8.8  

>12_01_0257 + 1898950-1899636
          Length = 228

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 326 DNMLEDDHEQHQRRQQLINYGHSQWGFNNWSW 421
           D++ +  H   ++ QQLI+   ++ GFN WSW
Sbjct: 13  DDVPDTSHMSDEQFQQLIDQYWAEQGFNIWSW 44


>11_01_0259 + 1981554-1982249
          Length = 231

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 326 DNMLEDDHEQHQRRQQLINYGHSQWGFNNWSW 421
           D++ +  H   ++ QQ I+   ++ GFN WSW
Sbjct: 13  DDVPDTSHMSDEQFQQFIDQYWAEQGFNIWSW 44


>01_03_0264 -
           14419381-14419431,14419807-14419875,14420771-14420817,
           14421340-14422474
          Length = 433

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = -1

Query: 583 INSKSFSGGE*SGVANIFPVYIETLYFDRYKGDDAGAILPVVEVDEIQFLFGDTPAPI 410
           +NS  F G     VAN+  +Y   +  +R  G   GA+L V E+  +   F D   PI
Sbjct: 145 LNSNRFCGVIPEEVANMTRLYELDVSNNRLVGAFPGAVLRVPELSYLDIRFNDFDGPI 202


>10_08_0253 -
           16196275-16196307,16196425-16196550,16196643-16196741,
           16196822-16197001,16197090-16197371,16197471-16199141,
           16199257-16199463,16199566-16199700,16199792-16200082,
           16200403-16200621,16200876-16201034,16201120-16201181,
           16201257-16201383,16201460-16201693,16201777-16202003,
           16202163-16202257,16202341-16202468,16202574-16202594,
           16202765-16202921,16203007-16203075,16203228-16203341,
           16203415-16203491,16203576-16203688,16204432-16204507,
           16204592-16204756,16204825-16204952,16205049-16205130,
           16205426-16205548,16205633-16205860,16205933-16206034,
           16206144-16206341,16206581-16206760,16206868-16207020,
           16207690-16207797,16208201-16208355,16208786-16208912,
           16209825-16209914,16209986-16210127,16210303-16210379,
           16210467-16210582,16210638-16210773,16211130-16211198,
           16211279-16211361,16211655-16211720,16211788-16211974,
           16212054-16213547,16213635-16214165,16214234-16214363,
           16214407-16215878,16216359-16216364,16216750-16217055,
           16217364-16217468,16217577-16217772,16217862-16217929,
           16218853-16220631,16221026-16221151,16221604-16221780,
           16221997-16222128,16223461-16223498,16223710-16223788,
           16224175-16224284,16224787-16224935,16225027-16225197,
           16225281-16225552,16226355-16226442,16227942-16228369
          Length = 5157

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = -1

Query: 655 SSNAASKAEKCLSKSICYRALPRLINSKSFSGGE*SGVANIFPVYIETLYFDRYKGDDAG 476
           S +AA+ A + L++    RA PR++   S +GG      ++     E L   RY     G
Sbjct: 6   SFSAAAAAARLLARCPALRADPRVLALASTAGGGGPSRDDVAAALAEPLLHPRYTVPVVG 65

Query: 475 AILPV 461
             LP+
Sbjct: 66  CFLPL 70


>06_03_0934 -
           26073084-26073220,26073296-26073345,26073465-26073634,
           26073651-26073803,26073877-26074032,26074227-26074350,
           26075066-26075178,26076336-26076469,26077391-26077578,
           26077718-26078139
          Length = 548

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = +2

Query: 530 ENIGYATSFAATKGFAIYKSRKCAVTNALRETLLSFGGSVAADLIDLLENKTESVLIGTE 709
           E +GY TS  A   FA+  +      +A+   ++ FGGS    L      K   V IG  
Sbjct: 162 EKLGYLTSTQALADFAVLITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAV 221

Query: 710 SHS 718
           + S
Sbjct: 222 ASS 224


>01_03_0022 + 11724319-11725381,11725476-11725582
          Length = 389

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 305 SPNLPNPDNMLEDDHEQHQRRQQLINYGHSQWGFNNW 415
           +P+  +PD   + +  +  +RQ  + YG    GF  W
Sbjct: 218 TPSSSSPDTATQSESSETTQRQPFMGYGQMANGFPKW 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,267,844
Number of Sequences: 37544
Number of extensions: 361672
Number of successful extensions: 988
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)