Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k24
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   9.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.1  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -1

Query: 391 VTIVDELLSTLMLLMVIFKHIVRIWQIWGAVGHFYIAI 278
           + + D L++ L++   ++  +   W + G V  FYIA+
Sbjct: 228 LAVADLLVAVLVMPFAVYVLVNGSWSLPGFVCDFYIAM 265


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 461 NGKYCAGVVAFVSIKVKSFD 520
           N K C+G+V+   I +  FD
Sbjct: 118 NYKDCSGIVSAYKIAIDKFD 137


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 461 NGKYCAGVVAFVSIKVKSFD 520
           N K C+G+V+   I +  FD
Sbjct: 118 NYKDCSGIVSAYKIAIDKFD 137


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 20   DIDNTQKQKILVTESSWLKP 79
            DID+ +K K+ +  S W +P
Sbjct: 1890 DIDSLKKLKLGLRSSLWSRP 1909


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 20   DIDNTQKQKILVTESSWLKP 79
            DID+ +K K+ +  S W +P
Sbjct: 1886 DIDSLKKLKLGLRSSLWSRP 1905


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,416
Number of Sequences: 438
Number of extensions: 4195
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)