BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11k23
(196 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017587-1|AAH17587.1| 244|Homo sapiens chromosome 7 open readi... 32 0.28
AK097635-1|BAC05126.1| 244|Homo sapiens protein ( Homo sapiens ... 32 0.28
>BC017587-1|AAH17587.1| 244|Homo sapiens chromosome 7 open reading
frame 45 protein.
Length = 244
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -1
Query: 172 TFIDWYTSIQCVVCVFFGRAIVWMEEEKRNQ 80
+F+ WY I V+ +FF RA VWM E+K+++
Sbjct: 40 SFLLWYFVIVFVL-MFFSRASVWMSEDKKDE 69
>AK097635-1|BAC05126.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ40316 fis, clone TESTI2030342. ).
Length = 244
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -1
Query: 172 TFIDWYTSIQCVVCVFFGRAIVWMEEEKRNQ 80
+F+ WY I V+ +FF RA VWM E+K+++
Sbjct: 40 SFLLWYFVIVFVL-MFFSRASVWMSEDKKDE 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,447,124
Number of Sequences: 237096
Number of extensions: 496602
Number of successful extensions: 1186
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1328536760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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