Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k19
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104936-1|AAI04937.1|  242|Homo sapiens chromosome 15 open read...   173   5e-43
BC104934-1|AAI04935.1|  242|Homo sapiens chromosome 15 open read...   173   5e-43
BC012456-1|AAH12456.1|  234|Homo sapiens C15orf24 protein protein.    173   5e-43
AY358445-1|AAQ88810.1|  242|Homo sapiens AAAL905 protein.             173   5e-43
AJ250344-1|CAB96539.1|  242|Homo sapiens hypothetical protein pr...   173   5e-43
AJ245874-1|CAC01611.1|  242|Homo sapiens putative ATG/GTP bindin...   173   5e-43
AF242729-1|AAG44477.1|  242|Homo sapiens HT022 protein.               173   5e-43

>BC104936-1|AAI04937.1|  242|Homo sapiens chromosome 15 open reading
           frame 24 protein.
          Length = 242

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 47  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 105

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 106 DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 165

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 166 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 200


>BC104934-1|AAI04935.1|  242|Homo sapiens chromosome 15 open reading
           frame 24 protein.
          Length = 242

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 47  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 105

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 106 DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 165

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 166 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 200


>BC012456-1|AAH12456.1|  234|Homo sapiens C15orf24 protein protein.
          Length = 234

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 39  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 97

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 98  DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 157

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 158 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 192


>AY358445-1|AAQ88810.1|  242|Homo sapiens AAAL905 protein.
          Length = 242

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 47  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 105

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 106 DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 165

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 166 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 200


>AJ250344-1|CAB96539.1|  242|Homo sapiens hypothetical protein
           protein.
          Length = 242

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 47  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 105

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 106 DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 165

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 166 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 200


>AJ245874-1|CAC01611.1|  242|Homo sapiens putative ATG/GTP binding
           protein protein.
          Length = 242

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 47  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 105

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 106 DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 165

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 166 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 200


>AF242729-1|AAG44477.1|  242|Homo sapiens HT022 protein.
          Length = 242

 Score =  173 bits (421), Expect = 5e-43
 Identities = 81/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +2

Query: 176 IEGRVFPPEDPNNSNWQLDTRVHVNGGEYIGFVREDGTFVVHNLPSGSYVVEIVHPDYMY 355
           IEGR   P      +W    RV V+G E++GF++ DG+FVVH++PSGSYVVE+V P Y +
Sbjct: 47  IEGRAVVP-GVKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRF 105

Query: 356 EPVRVEINSKGKYRARKVNYVQTSQVIQVPYPLRMKPVTKFRYFQVREQWRLTDFLFNPM 535
           +PVRV+I SKGK RAR VNY++TS+V+++PYPL+MK      YF  RE W  TDFL NPM
Sbjct: 106 DPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPM 165

Query: 536 VVMMVLPLFLIMILPKMMN--DPETKEDLKQISNL 634
           V+MMVLPL + ++LPK++N  DP+ + +++Q  N+
Sbjct: 166 VMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNM 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,842,897
Number of Sequences: 237096
Number of extensions: 2008142
Number of successful extensions: 5297
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5297
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)