Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k18
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.14 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.7  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   3.9  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   5.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 14/60 (23%), Positives = 35/60 (58%)
 Frame = -2

Query: 350  QIVLNHSCYQSLRQHPQRFRTL*KRSPDASQSHNPKVFEHQPNPRKG*KQRLKLSRRPPQ 171
            +++++HS  ++ +Q PQ+ +   ++     QS  P+  + QP P++  +Q+ +  ++P Q
Sbjct: 1490 KLIVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQ--QQQPQPQQ--QQQQQQQQQPQQ 1545


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -2

Query: 314 RQHPQRFRT--L*KRSPDASQSHNPKVFEHQPN 222
           R++ +RF +  + +RSP +S+S +P +   QP+
Sbjct: 22  RRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPH 54


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 678 KPFSCVHKDRKFS 640
           KPFSC H +R F+
Sbjct: 69  KPFSCQHCNRAFA 81


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 678 KPFSCVHKDRKFSAV 634
           KP+ C H DR+F  V
Sbjct: 36  KPYHCSHCDRQFVQV 50


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 281 KRSPDASQSHNPKVFEHQPNP 219
           +R P+A   +N  V+  QP P
Sbjct: 117 RREPEAEPGNNRPVYIPQPRP 137



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 281 KRSPDASQSHNPKVFEHQPNP 219
           +R P+A   +N  V+  QP P
Sbjct: 143 RREPEAEPGNNRPVYIPQPRP 163


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 338 NHSCYQSLRQHPQRFRTL*KRSPDASQSHNPKVFEHQPNPR 216
           + S  Q+LR      RT    SP   + +NP + + QP+P+
Sbjct: 405 SQSTIQTLRPQVSPDRT----SPMEYRLYNPALIQSQPSPQ 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,032
Number of Sequences: 438
Number of extensions: 3326
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)