Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k17
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0585 - 4200230-4201282                                          100   2e-21
04_04_0188 - 23433753-23436572                                         30   2.0  
11_06_0234 + 21574380-21575197,21576131-21576190,21578320-215800...    29   3.5  
05_05_0097 - 22356209-22357227,22357314-22357445,22357537-223577...    29   4.7  
07_01_0005 + 41687-43405                                               28   8.2  

>06_01_0585 - 4200230-4201282
          Length = 350

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
 Frame = +2

Query: 116 GCDGGTI--PRRDELVRM--KKKPEQKDKDAERSFKWRNCALSQQILQEPIVACSLGRLY 283
           G DGG      RD  + M   KKP++ D +  R  ++  CALS + L  P VA  LG L+
Sbjct: 85  GGDGGATGAESRDCYLSMYLAKKPDKADPNEARLSRFTCCALSGEPLAAPAVADRLGNLF 144

Query: 284 SKSSVLEALLDKETRPESINHXXXXXXXXXXXXXXXPAYVPTDHTDGTFDNGSAPYICPI 463
           +K +++EALL K   P++++H               P        D         + CP+
Sbjct: 145 NKEALVEALLHKRL-PKALSHIRGLKDMIPIHLHPKP--------DADAAGEEVRFQCPV 195

Query: 464 SGLEMTGKFRFVFLWSCGCVLAERALKEVRQNLCHMCQQPFTDNDIVVLNGTEEDIEKLK 643
           +GL+  GK++F+ L  CG VL+ +ALKEV+ + C +C + F + D + LNGTE+++  L+
Sbjct: 196 TGLDFNGKYQFLALRKCGHVLSVKALKEVKTSACLVCHKEFDEADKMPLNGTEDEVAALR 255

Query: 644 DKMAIRVSNRKNIKKNK 694
            +M       K  K+ K
Sbjct: 256 LRMEEERGKVKEKKEKK 272


>04_04_0188 - 23433753-23436572
          Length = 939

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 264 HATIGSCSICCESAQLRHLKLLSASLSFCSGFFFIRTSS 148
           + T+G   +C E AQL H + L A+L  C   F I+ ++
Sbjct: 266 YTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNA 304


>11_06_0234 +
           21574380-21575197,21576131-21576190,21578320-21580053,
           21581859-21582006
          Length = 919

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -1

Query: 580 LLTHMAQVLSDFLQCPLSKHTATAPEKNKTKFSSHLQATNRADVRSTPIIKCPISMV 410
           +L  +  V S   Q   ++  A     N+ KF +    T  A +RS   I+CPISM+
Sbjct: 530 ILDRLYDVHSSSSQSSTARRVAWHKSLNQDKFDN--LTTGMAQLRSLNAIECPISMI 584


>05_05_0097 -
           22356209-22357227,22357314-22357445,22357537-22357781,
           22357870-22358015
          Length = 513

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 444 ALPLSNVPSVWSVGTYAGFLTSFRSLISFRF 352
           +LPL ++P+    G  A F  SFRSL S ++
Sbjct: 288 SLPLPSLPAYNDTGAVANFSASFRSLASAQY 318


>07_01_0005 + 41687-43405
          Length = 572

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 395 AYVPTDHTDGTFDNGSAPYICPISGL-EMTGKFRFVFLWSCGCVLA 529
           A V T  TD   D GS   +CP++ + E+    R + +W+ G V++
Sbjct: 296 AAVVTPTTDKDDDTGSRWRLCPVTQVEELKAVVRLLPVWASGIVMS 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,112,693
Number of Sequences: 37544
Number of extensions: 368481
Number of successful extensions: 1102
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)