Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k13
         (145 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0199 + 32310272-32311432                                         27   1.6  
08_01_0785 - 7604353-7604363,7604420-7604482,7604780-7605056,760...    27   2.8  
10_07_0036 + 12237313-12237414,12237759-12237989                       26   3.6  
03_06_0498 - 34341441-34341575,34341808-34341945,34342019-343421...    26   4.8  
10_02_0062 - 4814139-4814176,4814571-4815627                           25   6.4  
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503...    25   6.4  
02_01_0495 - 3586803-3586868,3587718-3588021,3591019-3591032           25   6.4  
01_03_0311 + 14905995-14906393,14906982-14907009,14907893-149079...    25   6.4  
10_01_0146 - 1719997-1720386,1721498-1721515                           25   8.4  
02_02_0359 - 9390175-9390416,9390924-9391044,9391069-9391410,939...    25   8.4  

>03_06_0199 + 32310272-32311432
          Length = 386

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 73  SHIPRAPLLRGDLVGGSALY 132
           S  PR PLLRG + GGSA +
Sbjct: 203 SREPRVPLLRGGIRGGSAAH 222


>08_01_0785 -
           7604353-7604363,7604420-7604482,7604780-7605056,
           7605403-7605474,7606321-7606551
          Length = 217

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 16  WVLKSMGPRSAHNTMQTV-ESHIPRAPLLRGDLVGGSA 126
           W+L + G  + H+TM T  E      P LR D    +A
Sbjct: 131 WMLPTQGQETIHDTMNTAYEMSSSETPPLRADQAAAAA 168


>10_07_0036 + 12237313-12237414,12237759-12237989
          Length = 110

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 16  WVLKSMGPRSAHNTMQTV-ESHIPRAPLLRGDLVGGSA 126
           W+L + G  + H+TM T  E      P LR D    +A
Sbjct: 64  WMLPTQGQETTHDTMNTAYEMSSSETPPLRADQAATAA 101


>03_06_0498 -
           34341441-34341575,34341808-34341945,34342019-34342117,
           34342320-34342400,34342548-34342610,34342717-34342764,
           34343033-34343410,34345413-34345537,34345635-34345701,
           34345797-34345856,34346495-34346621,34346670-34346986
          Length = 545

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 125 AEPPTRSPRKRGARGM 78
           A  PT +PR RGARG+
Sbjct: 21  AAAPTNAPRPRGARGL 36


>10_02_0062 - 4814139-4814176,4814571-4815627
          Length = 364

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 100 AKGARGVCETQRSAWCCEQTAGPWI 26
           +K   G CE      CC+QT  P +
Sbjct: 205 SKARNGPCENATGLGCCQQTLPPGV 229


>03_06_0285 +
           32848085-32848988,32849057-32849245,32850136-32850311,
           32850569-32851141
          Length = 613

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 94  GARGVCETQRSAWCCEQTAGPWIL 23
           G  G+ +   SA CC   +G W++
Sbjct: 329 GLHGIADQSCSADCCGTASGAWVI 352


>02_01_0495 - 3586803-3586868,3587718-3588021,3591019-3591032
          Length = 127

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 138 FRVEGRTSYEVPAQKGRAGYVRL 70
           FRV GRT   +P    R+ Y RL
Sbjct: 64  FRVTGRTHATLPCNASRSDYYRL 86


>01_03_0311 +
           14905995-14906393,14906982-14907009,14907893-14907930,
           14908741-14908878,14909180-14909356,14909497-14909550,
           14909713-14909813,14910445-14910739
          Length = 409

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 32  WARGLLTTPCRPLSLTYPARPFCAGTS*EVRPSTR 136
           W R + T   RPL+     RP  A  S  V  +TR
Sbjct: 30  WTRPVTTARLRPLAAVTRTRPVTAARSRPVAATTR 64


>10_01_0146 - 1719997-1720386,1721498-1721515
          Length = 135

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 128 RAEPPTRSPRKRGARG 81
           R+EP T  PR+R +RG
Sbjct: 93  RSEPATTQPRRRASRG 108


>02_02_0359 -
           9390175-9390416,9390924-9391044,9391069-9391410,
           9392400-9392759
          Length = 354

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 105 PAQKGRAGYVRLNGLHG 55
           PA++GR GYV + GL G
Sbjct: 54  PAREGRNGYVFVKGLKG 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.131    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,861,545
Number of Sequences: 37544
Number of extensions: 74233
Number of successful extensions: 138
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 14,793,348
effective HSP length: 28
effective length of database: 13,742,116
effective search space used: 261100204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)