Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k13
         (145 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M28334-1|AAA28422.1|  421|Drosophila melanogaster type VI-relate...    29   0.88 
BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p pro...    29   1.2  
AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,...    29   1.2  
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag...    28   1.5  
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I...    28   1.5  
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co...    28   1.5  
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,...    28   1.5  
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,...    28   1.5  
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,...    28   1.5  

>M28334-1|AAA28422.1|  421|Drosophila melanogaster type VI-related
           collagen protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 0.88
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99  QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
           QKG  GY  LNG  G V  P   GF  P
Sbjct: 57  QKGDTGYPGLNGTDGPVGAPGERGFTGP 84


>BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p
           protein.
          Length = 1041

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 142 FFSGRGPNLLRGPRAKGARGVCETQRSAWCCE 47
           FF+G   NL+    +   RG+ + Q SA  CE
Sbjct: 887 FFTGAASNLVGNNASNDGRGISQAQTSAGTCE 918


>AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,
           isoform A protein.
          Length = 1041

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 142 FFSGRGPNLLRGPRAKGARGVCETQRSAWCCE 47
           FF+G   NL+    +   RG+ + Q SA  CE
Sbjct: 887 FFTGAASNLVGNNASNDGRGISQAQTSAGTCE 918


>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
            protein.
          Length = 1775

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99   QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
            QKG  GY  LNG  G V  P   GF  P
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438


>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
            collagen protein.
          Length = 1775

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99   QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
            QKG  GY  LNG  G V  P   GF  P
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438


>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
            pro-collagen protein.
          Length = 1775

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99   QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
            QKG  GY  LNG  G V  P   GF  P
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438


>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
            isoform C protein.
          Length = 1779

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99   QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
            QKG  GY  LNG  G V  P   GF  P
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439


>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
            isoform B protein.
          Length = 1779

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99   QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
            QKG  GY  LNG  G V  P   GF  P
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439


>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
            isoform A protein.
          Length = 1779

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -2

Query: 99   QKGRAGYVRLNGLHGVVSRPRAHGF*DP 16
            QKG  GY  LNG  G V  P   GF  P
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.131    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,614,507
Number of Sequences: 53049
Number of extensions: 110313
Number of successful extensions: 332
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 24,988,368
effective HSP length: 28
effective length of database: 23,502,996
effective search space used: 446556924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)